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The map label for this gene is 110680012

Identifier: 110680012

GI number: 110680012

Start: 2672155

End: 2672595

Strand: Direct

Name: 110680012

Synonym: RD1_2804

Alternate gene names: NA

Gene position: 2672155-2672595 (Clockwise)

Preceding gene: 110680011

Following gene: 110680013

Centisome position: 64.65

GC content: 55.1

Gene sequence:

>441_bases
ATGTCCGCGACCCCCGACCCACAGGCCCATCCCGATTTTTACAAAGATGTCCCCCTTAAGCGGCTGCTTGCATGGGTCGT
TGACGCGCTCATCACGCTGCTGGCCTGTATAATCATCCTGCCCTTCACGGCTTTTACCGGTATCTTCTTCTTTCCCTTCC
TGTTTCTGGTGGTGGGGTTCGCCTATCGGTTTGTCACCATCGCAAACAGCTCCGCGACATGGGGCATGCGGGTTTTCGCG
ATTGAATTGCGCCAGTCCGATGGCTCCCGAATGAGCCCGGCCGCGGCCTTTGCCCATACCCTCGGGTATACGCTGAGCTG
GACGGTACCCGTTTTTCAGTTGATTTCAATTATCATGATGGCCGCGACAGAGCGTGGACAAGGTTTGTCCGATCATGTTT
TGGGGACCGTGATGATCAACAGGCGTGCGGTAATAAGTTAA

Upstream 100 bases:

>100_bases
CAAGAAAAGCGAAGAACGCGCCACAGAGGCATAATACCCGCACAGCAAGTGGCTTCCGGAGAGCGATCCGGGGGCCCGCA
CACCAAGAGAAAGCACGAAG

Downstream 100 bases:

>100_bases
CCTTTGATATCTTGCCATCTGGCCGATGTCCTTGCTAGTCTGCCGGGGAAGTTCGGCAAGGAATTACATGCGTCATACGT
TACCGATAGCGCCTCAGTTT

Product: RD1_D family protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; RDD Domain Protein; RD1_D Family Domain Protein; RD1_D Family Protein; RDD Family; RDD Domain-Containing Protein

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSATPDPQAHPDFYKDVPLKRLLAWVVDALITLLACIIILPFTAFTGIFFFPFLFLVVGFAYRFVTIANSSATWGMRVFA
IELRQSDGSRMSPAAAFAHTLGYTLSWTVPVFQLISIIMMAATERGQGLSDHVLGTVMINRRAVIS

Sequences:

>Translated_146_residues
MSATPDPQAHPDFYKDVPLKRLLAWVVDALITLLACIIILPFTAFTGIFFFPFLFLVVGFAYRFVTIANSSATWGMRVFA
IELRQSDGSRMSPAAAFAHTLGYTLSWTVPVFQLISIIMMAATERGQGLSDHVLGTVMINRRAVIS
>Mature_145_residues
SATPDPQAHPDFYKDVPLKRLLAWVVDALITLLACIIILPFTAFTGIFFFPFLFLVVGFAYRFVTIANSSATWGMRVFAI
ELRQSDGSRMSPAAAFAHTLGYTLSWTVPVFQLISIIMMAATERGQGLSDHVLGTVMINRRAVIS

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16146; Mature: 16015

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATPDPQAHPDFYKDVPLKRLLAWVVDALITLLACIIILPFTAFTGIFFFPFLFLVVGF
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYRFVTIANSSATWGMRVFAIELRQSDGSRMSPAAAFAHTLGYTLSWTVPVFQLISIIMM
HHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AATERGQGLSDHVLGTVMINRRAVIS
HHHHCCCCCHHHHHHHHHHCCHHHCC
>Mature Secondary Structure 
SATPDPQAHPDFYKDVPLKRLLAWVVDALITLLACIIILPFTAFTGIFFFPFLFLVVGF
CCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYRFVTIANSSATWGMRVFAIELRQSDGSRMSPAAAFAHTLGYTLSWTVPVFQLISIIMM
HHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AATERGQGLSDHVLGTVMINRRAVIS
HHHHCCCCCHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA