Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is ywbO [H]

Identifier: 110679956

GI number: 110679956

Start: 2614265

End: 2614906

Strand: Direct

Name: ywbO [H]

Synonym: RD1_2744

Alternate gene names: 110679956

Gene position: 2614265-2614906 (Clockwise)

Preceding gene: 110679955

Following gene: 110679957

Centisome position: 63.25

GC content: 57.94

Gene sequence:

>642_bases
ATGACCGAAAAGACCAAGATTGACATCATATCAGACCCGATCTGCCCGTGGTGCTATATCGGCAAGACGAATCTGGACCG
CGCATTGGCGGAAAATCCGGATCACCCTTTCCTGATTGAATGGCATCCCTTTCAACTCAACCCGGAAATGCCAGCAGACG
GCATGGACCGGCGCGCCTATCTCGAAGGAAAATTCGGCGGCAAGGAAGGTGCTGTGCGCGCTTATGCACCTGTCGTTGAA
CATGCCAAAGCCGCCGGGTTGGAGATCGACTTCGAAGCGATGAAGCGCACCCCGAACACCATAGATGCACACCGATTGAT
TCACTGGGCCGGGATCGAGGGGTGCCAGACGGCCGCCGTGTCGGCCCTGTTCAAGGCCTATTTTGAAGAAGGCCGCGACA
TCGGCGACACCGAGGTTCTTGCCGACATTGCCGACAGCATCGGCATGGACGCGGCGGTGGTTGGCAGGCTTTTGAAATCC
GATGCGGACATCGAGGACATCAAAGCGCGCGATGCGCATAGTCGCAGCATGGGTGTGACATCGGTGCCGACCTTTGTCGT
TGCGGGCAAACATGCGGTGCCCGGTGCGCAGCCTGCAGAGCTCTGGCGCAAGGTGATCGAAGAGGTCTCTACGAATAGCT
GA

Upstream 100 bases:

>100_bases
TACAAACAGCCGCGCGTGTTCGAACACCTGCCGGACCTGCCCATGGGCGCAAATGGCAAAATCCTGCGCCGTGTTCTGCG
CCAACGCTTTGAGAGGCACC

Downstream 100 bases:

>100_bases
CGGTAATGTGCAAAAATGCGACAATGCCACACCAAGTGGCGATTGAAGAGGGTTCAACTCTAGGTTATGTCTGACGCCAA
GTAGCGCCAAATTATGAACG

Product: DSBA-like thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTEKTKIDIISDPICPWCYIGKTNLDRALAENPDHPFLIEWHPFQLNPEMPADGMDRRAYLEGKFGGKEGAVRAYAPVVE
HAKAAGLEIDFEAMKRTPNTIDAHRLIHWAGIEGCQTAAVSALFKAYFEEGRDIGDTEVLADIADSIGMDAAVVGRLLKS
DADIEDIKARDAHSRSMGVTSVPTFVVAGKHAVPGAQPAELWRKVIEEVSTNS

Sequences:

>Translated_213_residues
MTEKTKIDIISDPICPWCYIGKTNLDRALAENPDHPFLIEWHPFQLNPEMPADGMDRRAYLEGKFGGKEGAVRAYAPVVE
HAKAAGLEIDFEAMKRTPNTIDAHRLIHWAGIEGCQTAAVSALFKAYFEEGRDIGDTEVLADIADSIGMDAAVVGRLLKS
DADIEDIKARDAHSRSMGVTSVPTFVVAGKHAVPGAQPAELWRKVIEEVSTNS
>Mature_212_residues
TEKTKIDIISDPICPWCYIGKTNLDRALAENPDHPFLIEWHPFQLNPEMPADGMDRRAYLEGKFGGKEGAVRAYAPVVEH
AKAAGLEIDFEAMKRTPNTIDAHRLIHWAGIEGCQTAAVSALFKAYFEEGRDIGDTEVLADIADSIGMDAAVVGRLLKSD
ADIEDIKARDAHSRSMGVTSVPTFVVAGKHAVPGAQPAELWRKVIEEVSTNS

Specific function: Unknown

COG id: COG2761

COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 23285; Mature: 23153

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKTKIDIISDPICPWCYIGKTNLDRALAENPDHPFLIEWHPFQLNPEMPADGMDRRAY
CCCCCEEEEECCCCCCEEEECCCCHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCEEE
LEGKFGGKEGAVRAYAPVVEHAKAAGLEIDFEAMKRTPNTIDAHRLIHWAGIEGCQTAAV
ECCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH
SALFKAYFEEGRDIGDTEVLADIADSIGMDAAVVGRLLKSDADIEDIKARDAHSRSMGVT
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
SVPTFVVAGKHAVPGAQPAELWRKVIEEVSTNS
CCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TEKTKIDIISDPICPWCYIGKTNLDRALAENPDHPFLIEWHPFQLNPEMPADGMDRRAY
CCCCEEEEECCCCCCEEEECCCCHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCEEE
LEGKFGGKEGAVRAYAPVVEHAKAAGLEIDFEAMKRTPNTIDAHRLIHWAGIEGCQTAAV
ECCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH
SALFKAYFEEGRDIGDTEVLADIADSIGMDAAVVGRLLKSDADIEDIKARDAHSRSMGVT
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
SVPTFVVAGKHAVPGAQPAELWRKVIEEVSTNS
CCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]