Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yeiC [C]

Identifier: 110679947

GI number: 110679947

Start: 2605396

End: 2606289

Strand: Direct

Name: yeiC [C]

Synonym: RD1_2733

Alternate gene names: 110679947

Gene position: 2605396-2606289 (Clockwise)

Preceding gene: 110679946

Following gene: 110679948

Centisome position: 63.04

GC content: 64.32

Gene sequence:

>894_bases
ATGATGTCCAAGCCTGATATCCTTTGCATCGGCTCCGTTTTATGGGACGTGATCGGCCGCTCGGCCAGCGCCATGCGGCA
AGGCTCCGACGTGCCGGGGCGGATCACGCGCCTGCCGGGCGGGGTCGCGATGAACATCGCAATGACGCTGGCTCGATTCG
GCCTGACGCCTGCCATCCTGACCACCGTCGGGCAGGACAGCGCAGGGGATGAATTGCTCAGCGCATGCGCGGCGCGCGGC
ATTGTGACGGACCTTGTGTATCGCTCCGCTGACCTGCCGACGGATCAGTACATGGCCATCGAGGGGGCAAACGGCCTGAT
CGCGGCCATCGCCGATGCCCATTCTCTCGAAGCGGCAGGCGCCAAGATTCTCGCACCGCTCTCGGATGGGCGTGTGGCCT
GCGAAAACGCGCCTTTTCAGGGCCGCGTCGCTTTGGATGGCAATCTGACGCTGACCTTGTTGAGCGAGATCGCGCAAAGC
CCGCTGTTCTCCTGCGCCGATCTGCGCGTCGCGCCCGCCTCCCCCGGCAAGGCCGAGCGGTTGTTTCCTTTCGTCAAACA
GAGCCGCGGCACGCTTTACGTCAATCTTGAAGAGGCTGGATTGCTGTGTAACCAAACATTCAAAACGTCACGCGCTGCCG
CAGAAAACCTGTTGGCACTGGGCGCCGCCCGGGTCTTGGTGACCGATGGTGGTGCCGATGCGAGCGAAGGGCGACCGGAT
GGGCTGCTGACGCAGACGCCGCCACAGGTGCTGGTTGCGCGCGTGACCGGTGCGGGCGATACCTTCATGGCCGCCCATAT
CGCATCTGAAGCGCAGGGGCTGGACCCTGCCGCTGCCCTGGACCGGGCCCTCAAGGCCGCCGCAACCTATGTATCCGGAG
AAACACCCTCATGA

Upstream 100 bases:

>100_bases
CTGGGAAACCCTGTGGGCGGCTTTGACCTTTTCCGTCCCTTCCCGATGAAGCTGCGCAGCAGGGGCTTGATCCTTTGCGC
CTTCCCCGTCACAAGACCGC

Downstream 100 bases:

>100_bases
CCAACCTACCCTTGCGCCATAGTGCCGAAGTGGCCGCCGCCAAAGCCGCCGGACGCCCGATCGTGGCGCTGGAAAGCACC
ATCATCACCCACGGCATGCC

Product: pfkB family kinase, putative

Products: NA

Alternate protein names: Kinase PfkB Family; PfkB Domain Protein; PfkB Family Kinase; Carbohydrate Kinase PfkB Family; Carbohydrate Kinase; Kinase PfkB Family Protein; Carbohydrate/Purine Kinase Family Protein

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MMSKPDILCIGSVLWDVIGRSASAMRQGSDVPGRITRLPGGVAMNIAMTLARFGLTPAILTTVGQDSAGDELLSACAARG
IVTDLVYRSADLPTDQYMAIEGANGLIAAIADAHSLEAAGAKILAPLSDGRVACENAPFQGRVALDGNLTLTLLSEIAQS
PLFSCADLRVAPASPGKAERLFPFVKQSRGTLYVNLEEAGLLCNQTFKTSRAAAENLLALGAARVLVTDGGADASEGRPD
GLLTQTPPQVLVARVTGAGDTFMAAHIASEAQGLDPAAALDRALKAAATYVSGETPS

Sequences:

>Translated_297_residues
MMSKPDILCIGSVLWDVIGRSASAMRQGSDVPGRITRLPGGVAMNIAMTLARFGLTPAILTTVGQDSAGDELLSACAARG
IVTDLVYRSADLPTDQYMAIEGANGLIAAIADAHSLEAAGAKILAPLSDGRVACENAPFQGRVALDGNLTLTLLSEIAQS
PLFSCADLRVAPASPGKAERLFPFVKQSRGTLYVNLEEAGLLCNQTFKTSRAAAENLLALGAARVLVTDGGADASEGRPD
GLLTQTPPQVLVARVTGAGDTFMAAHIASEAQGLDPAAALDRALKAAATYVSGETPS
>Mature_297_residues
MMSKPDILCIGSVLWDVIGRSASAMRQGSDVPGRITRLPGGVAMNIAMTLARFGLTPAILTTVGQDSAGDELLSACAARG
IVTDLVYRSADLPTDQYMAIEGANGLIAAIADAHSLEAAGAKILAPLSDGRVACENAPFQGRVALDGNLTLTLLSEIAQS
PLFSCADLRVAPASPGKAERLFPFVKQSRGTLYVNLEEAGLLCNQTFKTSRAAAENLLALGAARVLVTDGGADASEGRPD
GLLTQTPPQVLVARVTGAGDTFMAAHIASEAQGLDPAAALDRALKAAATYVSGETPS

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788491, Length=277, Percent_Identity=28.158844765343, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30489; Mature: 30489

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00583 PFKB_KINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKPDILCIGSVLWDVIGRSASAMRQGSDVPGRITRLPGGVAMNIAMTLARFGLTPAIL
CCCCCCEEEHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHH
TTVGQDSAGDELLSACAARGIVTDLVYRSADLPTDQYMAIEGANGLIAAIADAHSLEAAG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCHHHHHHCC
AKILAPLSDGRVACENAPFQGRVALDGNLTLTLLSEIAQSPLFSCADLRVAPASPGKAER
CEEEEECCCCCEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHCCEECCCCCCCHHH
LFPFVKQSRGTLYVNLEEAGLLCNQTFKTSRAAAENLLALGAARVLVTDGGADASEGRPD
HHHHHHCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
GLLTQTPPQVLVARVTGAGDTFMAAHIASEAQGLDPAAALDRALKAAATYVSGETPS
CCCCCCCHHHEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMSKPDILCIGSVLWDVIGRSASAMRQGSDVPGRITRLPGGVAMNIAMTLARFGLTPAIL
CCCCCCEEEHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHH
TTVGQDSAGDELLSACAARGIVTDLVYRSADLPTDQYMAIEGANGLIAAIADAHSLEAAG
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCHHHHHHCC
AKILAPLSDGRVACENAPFQGRVALDGNLTLTLLSEIAQSPLFSCADLRVAPASPGKAER
CEEEEECCCCCEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHCCEECCCCCCCHHH
LFPFVKQSRGTLYVNLEEAGLLCNQTFKTSRAAAENLLALGAARVLVTDGGADASEGRPD
HHHHHHCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
GLLTQTPPQVLVARVTGAGDTFMAAHIASEAQGLDPAAALDRALKAAATYVSGETPS
CCCCCCCHHHEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA