Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is pstS [H]

Identifier: 110679869

GI number: 110679869

Start: 2522268

End: 2523308

Strand: Direct

Name: pstS [H]

Synonym: RD1_2642

Alternate gene names: 110679869

Gene position: 2522268-2523308 (Clockwise)

Preceding gene: 110679868

Following gene: 110679870

Centisome position: 61.03

GC content: 58.6

Gene sequence:

>1041_bases
ATGACGTTTGTAAAAATATCTTCCTCCGCGCTGGCGATTGCCGTCGTTGCCGCAACATCTGCTACGGCGCGCGATCAGGT
GCAGGTTGCCGGATCATCCACGGTTTTGCCCTATGCCGCCATTGTGGCTGAAGCATTCGGCGAAAACTTCGAGTTTCCGA
CGCCCGTCGTTGAGTCCGGGGGATCCTCGGCGGGTCTCAAGCGCTTTTGTGAGGGCGTTGGCGAAAATACAGTCGATATC
GCCAACTCGTCCCGTCCCATTCGCGAGCGCGAAATCGCGGCCTGCGCCGAAAACGGTGTGACGGACATCATCGAAGTGCG
CATCGGTTATGACGGGATCGTCTTTGCCAGCCAGCAGACCGGCCCTGCCTTTACCGAATTCCAGCCTTCGGACTGGTACA
CGGCACTGGCCGCAAACCTGCCGGTTGACGGTGAGATGGTCGCGAACCCAAACATGACATGGGACGCAGTCAACCCGGCG
CTGCCAGCGGTGGATATCGCGGCCTTCATTCCCGGCACCAAACACGGCACCCGCGAAGTATTCGAGGAAAAGGTTCTGCT
GCAGGGCTGCGAGGATACAGGTGCGATGCAAGCCATGATGGACATGGGCATGGATGAAGACGCGGCCGAAAGCGCCTGCA
TGGCCGTGCGCACAGACGGCAAATCAGTGGATATCGACGGTGATTACACCGAGACTCTGGCGCGGATCGAAAGCAATGCC
AACGGCATCGGCGTTTTCGGGCTGGCGTTTTATGAAAACAACACCGACAAGCTGAAAGTGGCCACCATGGGTGGTGTGGA
GCCGACGACAGAGACGATTTCGACCGGTGAATACCCCGTGTCGCGTCCGCTGTTCTTTTACATCAAGAAGGCGCACATCG
GTGTGATCCCGGGACTGAAGGACTTTGCCGAGTTTTTCGTTTCCGACGACATTGCGGGGCCGGATGGTCCGTTGGCTGAA
TATGGTCTGGTGTCCGATCCGGCGCTGGCCGAGACACAGGCCGCTGTCGCAGATGAAGACGTGTTGGGCAGCAACTCCTG
A

Upstream 100 bases:

>100_bases
TTACAAAACTGTCACAAAAGGATAGCGTCCAATCCTTAGCTATCCGGCAAGCGGTTGTGCATACGGTCATCCGCAGATTC
GTTTCATGACAGGAGCTATC

Downstream 100 bases:

>100_bases
CCTGAACAGAGACAAAAGCGGCGAAAGGCGGCAATTTCCTGCGGCCTTTCGCTTTACTTGAAGTGGCATGCGAAAAGGTT
GGGTGCATGACGATCGGGCT

Product: phosphate ABC transporter, periplasmic phosphate-binding protein

Products: NA

Alternate protein names: PBP [H]

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTFVKISSSALAIAVVAATSATARDQVQVAGSSTVLPYAAIVAEAFGENFEFPTPVVESGGSSAGLKRFCEGVGENTVDI
ANSSRPIREREIAACAENGVTDIIEVRIGYDGIVFASQQTGPAFTEFQPSDWYTALAANLPVDGEMVANPNMTWDAVNPA
LPAVDIAAFIPGTKHGTREVFEEKVLLQGCEDTGAMQAMMDMGMDEDAAESACMAVRTDGKSVDIDGDYTETLARIESNA
NGIGVFGLAFYENNTDKLKVATMGGVEPTTETISTGEYPVSRPLFFYIKKAHIGVIPGLKDFAEFFVSDDIAGPDGPLAE
YGLVSDPALAETQAAVADEDVLGSNS

Sequences:

>Translated_346_residues
MTFVKISSSALAIAVVAATSATARDQVQVAGSSTVLPYAAIVAEAFGENFEFPTPVVESGGSSAGLKRFCEGVGENTVDI
ANSSRPIREREIAACAENGVTDIIEVRIGYDGIVFASQQTGPAFTEFQPSDWYTALAANLPVDGEMVANPNMTWDAVNPA
LPAVDIAAFIPGTKHGTREVFEEKVLLQGCEDTGAMQAMMDMGMDEDAAESACMAVRTDGKSVDIDGDYTETLARIESNA
NGIGVFGLAFYENNTDKLKVATMGGVEPTTETISTGEYPVSRPLFFYIKKAHIGVIPGLKDFAEFFVSDDIAGPDGPLAE
YGLVSDPALAETQAAVADEDVLGSNS
>Mature_345_residues
TFVKISSSALAIAVVAATSATARDQVQVAGSSTVLPYAAIVAEAFGENFEFPTPVVESGGSSAGLKRFCEGVGENTVDIA
NSSRPIREREIAACAENGVTDIIEVRIGYDGIVFASQQTGPAFTEFQPSDWYTALAANLPVDGEMVANPNMTWDAVNPAL
PAVDIAAFIPGTKHGTREVFEEKVLLQGCEDTGAMQAMMDMGMDEDAAESACMAVRTDGKSVDIDGDYTETLARIESNAN
GIGVFGLAFYENNTDKLKVATMGGVEPTTETISTGEYPVSRPLFFYIKKAHIGVIPGLKDFAEFFVSDDIAGPDGPLAEY
GLVSDPALAETQAAVADEDVLGSNS

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36386; Mature: 36255

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFVKISSSALAIAVVAATSATARDQVQVAGSSTVLPYAAIVAEAFGENFEFPTPVVESG
CEEEEECCCCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHCC
GSSAGLKRFCEGVGENTVDIANSSRPIREREIAACAENGVTDIIEVRIGYDGIVFASQQT
CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCC
GPAFTEFQPSDWYTALAANLPVDGEMVANPNMTWDAVNPALPAVDIAAFIPGTKHGTREV
CCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH
FEEKVLLQGCEDTGAMQAMMDMGMDEDAAESACMAVRTDGKSVDIDGDYTETLARIESNA
HHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHEEEEECCCCEEECCCCHHHHHHHHHCCC
NGIGVFGLAFYENNTDKLKVATMGGVEPTTETISTGEYPVSRPLFFYIKKAHIGVIPGLK
CCEEEEEEEEEECCCCEEEEEEECCCCCCCHHCCCCCCCCCCCEEEEEEECCEECCCCHH
DFAEFFVSDDIAGPDGPLAEYGLVSDPALAETQAAVADEDVLGSNS
HHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TFVKISSSALAIAVVAATSATARDQVQVAGSSTVLPYAAIVAEAFGENFEFPTPVVESG
EEEEECCCCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHCC
GSSAGLKRFCEGVGENTVDIANSSRPIREREIAACAENGVTDIIEVRIGYDGIVFASQQT
CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCC
GPAFTEFQPSDWYTALAANLPVDGEMVANPNMTWDAVNPALPAVDIAAFIPGTKHGTREV
CCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH
FEEKVLLQGCEDTGAMQAMMDMGMDEDAAESACMAVRTDGKSVDIDGDYTETLARIESNA
HHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHEEEEECCCCEEECCCCHHHHHHHHHCCC
NGIGVFGLAFYENNTDKLKVATMGGVEPTTETISTGEYPVSRPLFFYIKKAHIGVIPGLK
CCEEEEEEEEEECCCCEEEEEEECCCCCCCHHCCCCCCCCCCCEEEEEEECCEECCCCHH
DFAEFFVSDDIAGPDGPLAEYGLVSDPALAETQAAVADEDVLGSNS
HHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA