| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is suhB [H]
Identifier: 110679745
GI number: 110679745
Start: 2391269
End: 2392054
Strand: Direct
Name: suhB [H]
Synonym: RD1_2507
Alternate gene names: 110679745
Gene position: 2391269-2392054 (Clockwise)
Preceding gene: 110679744
Following gene: 110679748
Centisome position: 57.86
GC content: 61.58
Gene sequence:
>786_bases ATGGTTGGCAGCGCAAATCTCAATATCATGATGAAAGCCGCACGGCGGGCGGGCCGATCTCTGGTCAAGGACTTCCGGGA GGTGGAGAACCTTCAGGTGTCCATGAAGGGGGCGGGCGATTTTGTCACCCGTGCTGATCTCAACGCCGAGAATGTCCTGA AAGAAGACCTCATGGGGGCGCGCCCGACCTATGGATGGCTTGCGGAGGAAAGTGGCGAGGAAGAGGGGCAGGACCCGACC CGCCGCTGGATCGTTGATCCGCTCGATGGGACCACCAACTTTCTGCACGGGCTGCCTCATTGGTCGGTGTCAATCGCGCT TGAGCACAAAGGGCAGGTGGTCGCCGGTGTTGTCTATGACCCGGCCAAGGACGAGATGTTCTTTGCCGAGAAAGGGGCCG GGGCCTGGATGAATGACAGCCGTTTGCGGGTGTCAGGGCGCAGCCAGATGATTGAGAGTATTTTCTCGACCGGCTTGCCT TACGCGGGCAGCACGGATTTGCCGGAAACGCTGCGCGATCTGGGCCGTATCTTGCCCGGATGTGCCGGGGTGCGGCGCTG GGGTGCCGCCTCGCTTGATCTGGCCTATGTCGCGGCGGGCCGGTATGATGGCTTTTGGGAACGCCGCCTCAAGGCGTGGG ATATCGCGGCCGGCGTGATCATCGTGCGCGAGGCAGGCGGGCTGCTCGAACCCTTCGATCCACGTGGTGATATTCTGGGG TCGGGCTCGCTCATCTGTGCCAATGAAAAACTGTTCTCACCCCTGGCCAAATTGGTGCGCGGCTGA
Upstream 100 bases:
>100_bases CGCAACAGGGAATGAATGCGGCTGCAGCGCGCAATGGCCCCTTGGCAAGGGCGTGATCTGCAACTATACGCGCACCCTGA TCTCCCGAAGGAACACGAAC
Downstream 100 bases:
>100_bases CGAAGCGCGCCAAGCCACGCTGGCCCGACCTGCCTAGCGGCGCGTCACTTTGGGAATGCGGCTTGGGCCGATGCGATAGG TGGCCTCGGGATGGGGCGGA
Product: inositol-1-monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGARPTYGWLAEESGEEEGQDPT RRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYDPAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLP YAGSTDLPETLRDLGRILPGCAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG SGSLICANEKLFSPLAKLVRG
Sequences:
>Translated_261_residues MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGARPTYGWLAEESGEEEGQDPT RRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYDPAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLP YAGSTDLPETLRDLGRILPGCAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG SGSLICANEKLFSPLAKLVRG >Mature_261_residues MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGARPTYGWLAEESGEEEGQDPT RRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYDPAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLP YAGSTDLPETLRDLGRILPGCAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG SGSLICANEKLFSPLAKLVRG
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=255, Percent_Identity=32.9411764705882, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI221625487, Length=255, Percent_Identity=32.9411764705882, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI7657236, Length=225, Percent_Identity=33.7777777777778, Blast_Score=124, Evalue=7e-29, Organism=Homo sapiens, GI221625507, Length=137, Percent_Identity=33.5766423357664, Blast_Score=83, Evalue=2e-16, Organism=Escherichia coli, GI1788882, Length=254, Percent_Identity=41.3385826771654, Blast_Score=213, Evalue=1e-56, Organism=Escherichia coli, GI1790659, Length=139, Percent_Identity=33.8129496402878, Blast_Score=69, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193202572, Length=252, Percent_Identity=32.1428571428571, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI193202570, Length=255, Percent_Identity=30.5882352941176, Blast_Score=117, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6320493, Length=237, Percent_Identity=32.0675105485232, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321836, Length=210, Percent_Identity=30.952380952381, Blast_Score=95, Evalue=1e-20, Organism=Drosophila melanogaster, GI24664922, Length=201, Percent_Identity=35.8208955223881, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI24664926, Length=260, Percent_Identity=27.3076923076923, Blast_Score=127, Evalue=6e-30, Organism=Drosophila melanogaster, GI21357329, Length=266, Percent_Identity=31.203007518797, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI21357957, Length=269, Percent_Identity=34.2007434944238, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI21357303, Length=229, Percent_Identity=33.1877729257642, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI24664918, Length=264, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28454; Mature: 28454
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHHHHHHHHHCCC RPTYGWLAEESGEEEGQDPTRRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYD CCCCCCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEEC PAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLPYAGSTDLPETLRDLGRILPG CCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC CAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCC SGSLICANEKLFSPLAKLVRG CCCEEEECHHHHHHHHHHHCC >Mature Secondary Structure MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHHHHHHHHHCCC RPTYGWLAEESGEEEGQDPTRRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYD CCCCCCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEEC PAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLPYAGSTDLPETLRDLGRILPG CCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC CAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCC SGSLICANEKLFSPLAKLVRG CCCEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]