Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is suhB [H]

Identifier: 110679745

GI number: 110679745

Start: 2391269

End: 2392054

Strand: Direct

Name: suhB [H]

Synonym: RD1_2507

Alternate gene names: 110679745

Gene position: 2391269-2392054 (Clockwise)

Preceding gene: 110679744

Following gene: 110679748

Centisome position: 57.86

GC content: 61.58

Gene sequence:

>786_bases
ATGGTTGGCAGCGCAAATCTCAATATCATGATGAAAGCCGCACGGCGGGCGGGCCGATCTCTGGTCAAGGACTTCCGGGA
GGTGGAGAACCTTCAGGTGTCCATGAAGGGGGCGGGCGATTTTGTCACCCGTGCTGATCTCAACGCCGAGAATGTCCTGA
AAGAAGACCTCATGGGGGCGCGCCCGACCTATGGATGGCTTGCGGAGGAAAGTGGCGAGGAAGAGGGGCAGGACCCGACC
CGCCGCTGGATCGTTGATCCGCTCGATGGGACCACCAACTTTCTGCACGGGCTGCCTCATTGGTCGGTGTCAATCGCGCT
TGAGCACAAAGGGCAGGTGGTCGCCGGTGTTGTCTATGACCCGGCCAAGGACGAGATGTTCTTTGCCGAGAAAGGGGCCG
GGGCCTGGATGAATGACAGCCGTTTGCGGGTGTCAGGGCGCAGCCAGATGATTGAGAGTATTTTCTCGACCGGCTTGCCT
TACGCGGGCAGCACGGATTTGCCGGAAACGCTGCGCGATCTGGGCCGTATCTTGCCCGGATGTGCCGGGGTGCGGCGCTG
GGGTGCCGCCTCGCTTGATCTGGCCTATGTCGCGGCGGGCCGGTATGATGGCTTTTGGGAACGCCGCCTCAAGGCGTGGG
ATATCGCGGCCGGCGTGATCATCGTGCGCGAGGCAGGCGGGCTGCTCGAACCCTTCGATCCACGTGGTGATATTCTGGGG
TCGGGCTCGCTCATCTGTGCCAATGAAAAACTGTTCTCACCCCTGGCCAAATTGGTGCGCGGCTGA

Upstream 100 bases:

>100_bases
CGCAACAGGGAATGAATGCGGCTGCAGCGCGCAATGGCCCCTTGGCAAGGGCGTGATCTGCAACTATACGCGCACCCTGA
TCTCCCGAAGGAACACGAAC

Downstream 100 bases:

>100_bases
CGAAGCGCGCCAAGCCACGCTGGCCCGACCTGCCTAGCGGCGCGTCACTTTGGGAATGCGGCTTGGGCCGATGCGATAGG
TGGCCTCGGGATGGGGCGGA

Product: inositol-1-monophosphatase

Products: NA

Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGARPTYGWLAEESGEEEGQDPT
RRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYDPAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLP
YAGSTDLPETLRDLGRILPGCAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG
SGSLICANEKLFSPLAKLVRG

Sequences:

>Translated_261_residues
MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGARPTYGWLAEESGEEEGQDPT
RRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYDPAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLP
YAGSTDLPETLRDLGRILPGCAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG
SGSLICANEKLFSPLAKLVRG
>Mature_261_residues
MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGARPTYGWLAEESGEEEGQDPT
RRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYDPAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLP
YAGSTDLPETLRDLGRILPGCAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG
SGSLICANEKLFSPLAKLVRG

Specific function: Unknown

COG id: COG0483

COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the inositol monophosphatase family [H]

Homologues:

Organism=Homo sapiens, GI5031789, Length=255, Percent_Identity=32.9411764705882, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI221625487, Length=255, Percent_Identity=32.9411764705882, Blast_Score=129, Evalue=2e-30,
Organism=Homo sapiens, GI7657236, Length=225, Percent_Identity=33.7777777777778, Blast_Score=124, Evalue=7e-29,
Organism=Homo sapiens, GI221625507, Length=137, Percent_Identity=33.5766423357664, Blast_Score=83, Evalue=2e-16,
Organism=Escherichia coli, GI1788882, Length=254, Percent_Identity=41.3385826771654, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1790659, Length=139, Percent_Identity=33.8129496402878, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193202572, Length=252, Percent_Identity=32.1428571428571, Blast_Score=121, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI193202570, Length=255, Percent_Identity=30.5882352941176, Blast_Score=117, Evalue=6e-27,
Organism=Saccharomyces cerevisiae, GI6320493, Length=237, Percent_Identity=32.0675105485232, Blast_Score=124, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6321836, Length=210, Percent_Identity=30.952380952381, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24664922, Length=201, Percent_Identity=35.8208955223881, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24664926, Length=260, Percent_Identity=27.3076923076923, Blast_Score=127, Evalue=6e-30,
Organism=Drosophila melanogaster, GI21357329, Length=266, Percent_Identity=31.203007518797, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI21357957, Length=269, Percent_Identity=34.2007434944238, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21357303, Length=229, Percent_Identity=33.1877729257642, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24664918, Length=264, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020583
- InterPro:   IPR000760
- InterPro:   IPR020550
- InterPro:   IPR022337 [H]

Pfam domain/function: PF00459 Inositol_P [H]

EC number: =3.1.3.25 [H]

Molecular weight: Translated: 28454; Mature: 28454

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHHHHHHHHHCCC
RPTYGWLAEESGEEEGQDPTRRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYD
CCCCCCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEEC
PAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLPYAGSTDLPETLRDLGRILPG
CCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
CAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG
HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCC
SGSLICANEKLFSPLAKLVRG
CCCEEEECHHHHHHHHHHHCC
>Mature Secondary Structure
MVGSANLNIMMKAARRAGRSLVKDFREVENLQVSMKGAGDFVTRADLNAENVLKEDLMGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHHHHHHHHHCCC
RPTYGWLAEESGEEEGQDPTRRWIVDPLDGTTNFLHGLPHWSVSIALEHKGQVVAGVVYD
CCCCCCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEEC
PAKDEMFFAEKGAGAWMNDSRLRVSGRSQMIESIFSTGLPYAGSTDLPETLRDLGRILPG
CCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
CAGVRRWGAASLDLAYVAAGRYDGFWERRLKAWDIAAGVIIVREAGGLLEPFDPRGDILG
HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCC
SGSLICANEKLFSPLAKLVRG
CCCEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]