Click here to switch to the map view.

The map label for this gene is 110679744

Identifier: 110679744

GI number: 110679744

Start: 2390359

End: 2391159

Strand: Direct

Name: 110679744

Synonym: RD1_2506

Alternate gene names: NA

Gene position: 2390359-2391159 (Clockwise)

Preceding gene: 110679742

Following gene: 110679745

Centisome position: 57.83

GC content: 62.92

Gene sequence:

>801_bases
ATGGGTCGGGTCATGAAAGCCGAATTTTTTCAAAAAGGGTGGGGCGTCTTTGCCCCTGAAGCCGCCACGCTGAACTGGGC
GCGGCATGCCTTGGGTGATGCGATTGACGCGCTGCACAATCCAGCGTTCAGCCAGTGGCACCAGTGCGAAAACACATGGT
TTGTCGGATTGGATGTGTTGAGCAATGACGCGCAAGGGTGCATTGCCGGATCTGCGCCGCTCTCGGGGTCTGCGGTGGAT
TTCATTGCAGAGGCCTGTGGCGGCTGGCCTGCATTGCACCGGGGGCAGGTGTCGGGGGTCTTTCCGGGTTATCCGCGCCC
GCGGGCAGGCGAAACAGAGGCCGGGTTCAGGTATCGCGCAAAGCGTGACGCCGCGCATGTGGATGGCGTTCTGGGTGTTG
GCACGCCCAAGCGTCGCTTCGTGCAAGAGCCGCACGCCTTTATCCTTGGGCTGCCGTTGACCCGGGCCGACCGGGATGCC
GCCCCTCTCGTGGTGTGGGAAGGCAGCCACAGGATCATGAAAAACGCTTTTAACAAGGCGTTTAGCACCACGCAAGCCAC
GGATTTGTCGACTGTGGACGTGACCGAGGTATATCAATCCGCGCGCCGCGCCGTTTTTGAAACCTGTCCGCGTGTCATCG
TGCATGGCCCGCCGGGGTCTGCCATTGTGGTGCATCGTCTGGCGCTGCACGGTGTGGCCCCGTGGGCGCAGGGGGCGACG
GCTGATCCGGAGGGTCGCTTGATTGCCTATTTCCGCCCTCCGATCGCGGGCGGGGTGCGGGCGTGGATCGAGATGCCCTA
G

Upstream 100 bases:

>100_bases
GGAGCTGGCGCAGCAGAGCGGGTAACACAGGGCGCAGGTTTGCAGCCCTGCGCGCAGGGTTTTTCAAGCGCCGTTGCATG
CAAGGTGCAATCGAGATGGA

Downstream 100 bases:

>100_bases
GGCAGGATGCGCAACAGGGAATGAATGCGGCTGCAGCGCGCAATGGCCCCTTGGCAAGGGCGTGATCTGCAACTATACGC
GCACCCTGATCTCCCGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MGRVMKAEFFQKGWGVFAPEAATLNWARHALGDAIDALHNPAFSQWHQCENTWFVGLDVLSNDAQGCIAGSAPLSGSAVD
FIAEACGGWPALHRGQVSGVFPGYPRPRAGETEAGFRYRAKRDAAHVDGVLGVGTPKRRFVQEPHAFILGLPLTRADRDA
APLVVWEGSHRIMKNAFNKAFSTTQATDLSTVDVTEVYQSARRAVFETCPRVIVHGPPGSAIVVHRLALHGVAPWAQGAT
ADPEGRLIAYFRPPIAGGVRAWIEMP

Sequences:

>Translated_266_residues
MGRVMKAEFFQKGWGVFAPEAATLNWARHALGDAIDALHNPAFSQWHQCENTWFVGLDVLSNDAQGCIAGSAPLSGSAVD
FIAEACGGWPALHRGQVSGVFPGYPRPRAGETEAGFRYRAKRDAAHVDGVLGVGTPKRRFVQEPHAFILGLPLTRADRDA
APLVVWEGSHRIMKNAFNKAFSTTQATDLSTVDVTEVYQSARRAVFETCPRVIVHGPPGSAIVVHRLALHGVAPWAQGAT
ADPEGRLIAYFRPPIAGGVRAWIEMP
>Mature_265_residues
GRVMKAEFFQKGWGVFAPEAATLNWARHALGDAIDALHNPAFSQWHQCENTWFVGLDVLSNDAQGCIAGSAPLSGSAVDF
IAEACGGWPALHRGQVSGVFPGYPRPRAGETEAGFRYRAKRDAAHVDGVLGVGTPKRRFVQEPHAFILGLPLTRADRDAA
PLVVWEGSHRIMKNAFNKAFSTTQATDLSTVDVTEVYQSARRAVFETCPRVIVHGPPGSAIVVHRLALHGVAPWAQGATA
DPEGRLIAYFRPPIAGGVRAWIEMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28742; Mature: 28611

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVMKAEFFQKGWGVFAPEAATLNWARHALGDAIDALHNPAFSQWHQCENTWFVGLDVL
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEE
SNDAQGCIAGSAPLSGSAVDFIAEACGGWPALHRGQVSGVFPGYPRPRAGETEAGFRYRA
CCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHH
KRDAAHVDGVLGVGTPKRRFVQEPHAFILGLPLTRADRDAAPLVVWEGSHRIMKNAFNKA
HCCHHHHCCEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHH
FSTTQATDLSTVDVTEVYQSARRAVFETCPRVIVHGPPGSAIVVHRLALHGVAPWAQGAT
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCC
ADPEGRLIAYFRPPIAGGVRAWIEMP
CCCCCCEEEEECCCCCCCCEEEEECC
>Mature Secondary Structure 
GRVMKAEFFQKGWGVFAPEAATLNWARHALGDAIDALHNPAFSQWHQCENTWFVGLDVL
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEE
SNDAQGCIAGSAPLSGSAVDFIAEACGGWPALHRGQVSGVFPGYPRPRAGETEAGFRYRA
CCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHH
KRDAAHVDGVLGVGTPKRRFVQEPHAFILGLPLTRADRDAAPLVVWEGSHRIMKNAFNKA
HCCHHHHCCEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHH
FSTTQATDLSTVDVTEVYQSARRAVFETCPRVIVHGPPGSAIVVHRLALHGVAPWAQGAT
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCC
ADPEGRLIAYFRPPIAGGVRAWIEMP
CCCCCCEEEEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA