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The map label for this gene is 110679726

Identifier: 110679726

GI number: 110679726

Start: 2366021

End: 2367289

Strand: Direct

Name: 110679726

Synonym: RD1_2485

Alternate gene names: NA

Gene position: 2366021-2367289 (Clockwise)

Preceding gene: 110679725

Following gene: 110679731

Centisome position: 57.25

GC content: 64.7

Gene sequence:

>1269_bases
ATGAGCATTGCCAAACGAGGCCGTCTTTACCACCTCCGCCGCCGCGTCCCGCGCCGGTATCGGGGCATCGAGCCGCGCGA
AACTGTCTGGATCAGCCTGCACACCGACTCGGAGACTATCGCTCGGAGTAAGGCAGACCGCGCGTGGAGCCAGATGATCG
AGGCTTGGGAGGCGCGGCTGGCCGGGAACAGTGAAGATGCAGAGGTCCGCTACGAAGCCGCCCGCGACCTCGCCCAGGCG
CGCGGCTTTCGGTATCTGGATGCGGGGGCGGTGGCCAAGTTGCCGGTTGAGGAAGTCGTCGAGCGCGTCGAGGCGATCCC
AGCCCCGGCGAAGCAACCCGATGCCATCGAGGCCGCGGCCCTTCTCGGCACCGCCCCGGAACCCCGGATGTCGGTCACCA
AGGCACTGGAGCTCTACTGGGGCCTCGCCAAGGAAAAGACCCTCGGCAAGAGCGAGGACCAGCTGCGCCGTTGGGAAGCA
CCGCGCAAGAAGGCGGTGAAGAACTTCGTCGCGGTTGTTGGCAACAAGGAGATCGCCAACATCACCCGCGACGACATGCT
GGACTTTCGCCAGCACTGGCTCGACCGGATTGAGGCGGGCGAGGTCACGGCGAATTCGGCCAACAAGGATCTGATCCACC
TGGGCGACGTGTTGAAGACCGTGAACATGATGAAGCGGCTTGGACTGGTGCTGCCGCTGGGCGAGTTGTCCTTCAAGGAG
GGCGAGAAGCATACGCGCCCGCCTTTCAGTGAGGATTGGATCAGGATGCGGCTGCTCGCGCCCAGTGCACTTGACGGGTT
GAATGGCCAGGCCCGCGCTTTGCTGCTGGGAATGATCAACACCGGCTACCGGCCGTCCGAAGGCGCTGCGCTGACGGCGG
AGACGATCCGGCTCGACTGCGATGTCCCGCACATCTCCATCGAGCCCGAGGGACGGCAGCTCAAGTCGCATTACGCGCGC
CGCATCATTCCGCTGACCGGAGTATCGCTCGAGTCCTTCAAGCAGTACCCTCAAGGCTTCCCGCGCTACCGCAACCGAGC
GACGCTCAGCGCGGTCGTCAACAAGTTCCTCCGAGCCAACGGCCTGCTCGAGACGCCGCGCCACTCGATGTATTCCCTGC
GCCATTCCTTCGAGGACCGCATGCTTGCCGCCAGGATCGACGACCGCATCCGCCGCGACCTTTTCGGTCATCGGCTTGAC
CGGGAACGGTATGGCAAGGGCGCATCGCTGGAACACGTCGCCGAACTCGTCGCCCGCATCGCCTTCTGA

Upstream 100 bases:

>100_bases
GCAGAATTCGGCGTTTTCGCGCTGAAGGCGGTGTTTGGTCCGCTTGATTTGCTGCGCATTTTGCTACACAATTTGCTGCA
CAAACGGAGATTTCTCCGCC

Downstream 100 bases:

>100_bases
GCCAGCAGCTCCCGCGCCCGGCGTTGCGCCTCCGACAGCCGTTTCTCCTTCTTCACGGCCGCGGCCAGTTCCGCCTCAAG
CCGCTCGAAGACCGGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein; Phage Integrase Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSIAKRGRLYHLRRRVPRRYRGIEPRETVWISLHTDSETIARSKADRAWSQMIEAWEARLAGNSEDAEVRYEAARDLAQA
RGFRYLDAGAVAKLPVEEVVERVEAIPAPAKQPDAIEAAALLGTAPEPRMSVTKALELYWGLAKEKTLGKSEDQLRRWEA
PRKKAVKNFVAVVGNKEIANITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNMMKRLGLVLPLGELSFKE
GEKHTRPPFSEDWIRMRLLAPSALDGLNGQARALLLGMINTGYRPSEGAALTAETIRLDCDVPHISIEPEGRQLKSHYAR
RIIPLTGVSLESFKQYPQGFPRYRNRATLSAVVNKFLRANGLLETPRHSMYSLRHSFEDRMLAARIDDRIRRDLFGHRLD
RERYGKGASLEHVAELVARIAF

Sequences:

>Translated_422_residues
MSIAKRGRLYHLRRRVPRRYRGIEPRETVWISLHTDSETIARSKADRAWSQMIEAWEARLAGNSEDAEVRYEAARDLAQA
RGFRYLDAGAVAKLPVEEVVERVEAIPAPAKQPDAIEAAALLGTAPEPRMSVTKALELYWGLAKEKTLGKSEDQLRRWEA
PRKKAVKNFVAVVGNKEIANITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNMMKRLGLVLPLGELSFKE
GEKHTRPPFSEDWIRMRLLAPSALDGLNGQARALLLGMINTGYRPSEGAALTAETIRLDCDVPHISIEPEGRQLKSHYAR
RIIPLTGVSLESFKQYPQGFPRYRNRATLSAVVNKFLRANGLLETPRHSMYSLRHSFEDRMLAARIDDRIRRDLFGHRLD
RERYGKGASLEHVAELVARIAF
>Mature_421_residues
SIAKRGRLYHLRRRVPRRYRGIEPRETVWISLHTDSETIARSKADRAWSQMIEAWEARLAGNSEDAEVRYEAARDLAQAR
GFRYLDAGAVAKLPVEEVVERVEAIPAPAKQPDAIEAAALLGTAPEPRMSVTKALELYWGLAKEKTLGKSEDQLRRWEAP
RKKAVKNFVAVVGNKEIANITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNMMKRLGLVLPLGELSFKEG
EKHTRPPFSEDWIRMRLLAPSALDGLNGQARALLLGMINTGYRPSEGAALTAETIRLDCDVPHISIEPEGRQLKSHYARR
IIPLTGVSLESFKQYPQGFPRYRNRATLSAVVNKFLRANGLLETPRHSMYSLRHSFEDRMLAARIDDRIRRDLFGHRLDR
ERYGKGASLEHVAELVARIAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47882; Mature: 47750

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAKRGRLYHLRRRVPRRYRGIEPRETVWISLHTDSETIARSKADRAWSQMIEAWEARL
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AGNSEDAEVRYEAARDLAQARGFRYLDAGAVAKLPVEEVVERVEAIPAPAKQPDAIEAAA
CCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHCCCHHHHHHHHHHCCCCCCCCCHHHHHH
LLGTAPEPRMSVTKALELYWGLAKEKTLGKSEDQLRRWEAPRKKAVKNFVAVVGNKEIAN
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHH
ITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNMMKRLGLVLPLGELSFKE
CCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GEKHTRPPFSEDWIRMRLLAPSALDGLNGQARALLLGMINTGYRPSEGAALTAETIRLDC
CCCCCCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEC
DVPHISIEPEGRQLKSHYARRIIPLTGVSLESFKQYPQGFPRYRNRATLSAVVNKFLRAN
CCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHC
GLLETPRHSMYSLRHSFEDRMLAARIDDRIRRDLFGHRLDRERYGKGASLEHVAELVARI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHH
AF
CC
>Mature Secondary Structure 
SIAKRGRLYHLRRRVPRRYRGIEPRETVWISLHTDSETIARSKADRAWSQMIEAWEARL
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AGNSEDAEVRYEAARDLAQARGFRYLDAGAVAKLPVEEVVERVEAIPAPAKQPDAIEAAA
CCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHCCCHHHHHHHHHHCCCCCCCCCHHHHHH
LLGTAPEPRMSVTKALELYWGLAKEKTLGKSEDQLRRWEAPRKKAVKNFVAVVGNKEIAN
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHH
ITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNMMKRLGLVLPLGELSFKE
CCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GEKHTRPPFSEDWIRMRLLAPSALDGLNGQARALLLGMINTGYRPSEGAALTAETIRLDC
CCCCCCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEC
DVPHISIEPEGRQLKSHYARRIIPLTGVSLESFKQYPQGFPRYRNRATLSAVVNKFLRAN
CCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHC
GLLETPRHSMYSLRHSFEDRMLAARIDDRIRRDLFGHRLDRERYGKGASLEHVAELVARI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHH
AF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA