Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679725

Identifier: 110679725

GI number: 110679725

Start: 2362266

End: 2362562

Strand: Direct

Name: 110679725

Synonym: RD1_2482

Alternate gene names: NA

Gene position: 2362266-2362562 (Clockwise)

Preceding gene: 110679724

Following gene: 110679726

Centisome position: 57.15

GC content: 60.61

Gene sequence:

>297_bases
ATGACAACCATACACTCAGCCGACCCCGAAATGCTTAGCAACGCATCTGTAGACACAAAAGACAAGCGGCGCGGACCAGA
CGCGAAAGAGGCGACTGAAGCCGCGCGTGATTACGCCATGCAAACCTCCACTGCGGCGATGGAAACGGCCGAAGCAGTTG
CTTCCGACGTGCGCGCCGAAGTAACGAAAGTCACCGCCGCCGCGCGCGATTTTGCGGTCAAACAGCCAGTGGCAACGGCA
GCAGGGGCGTTGGCGCTTGGCGTGCTTCTGGGTATGGCGGTCAACCGGCGTCGCTAA

Upstream 100 bases:

>100_bases
CGCAGCGGCATTGAGGCCGGGTACGAGCAAATCCGGCCGCACTAGGCGCCGCGATGCCTTCCGGCACGCACCATGACACA
TATTTTCAAGGAGACCACTG

Downstream 100 bases:

>100_bases
GGGAACTTGCATTCGCTGCAACTCAACGCCAGCGTGTCCCTGTTTTTACGATGACCCCGCGCTGTGCTGGAATCCTGCGC
ACATCCTCATAAGAAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAEVTKVTAAARDFAVKQPVATA
AGALALGVLLGMAVNRRR

Sequences:

>Translated_98_residues
MTTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAEVTKVTAAARDFAVKQPVATA
AGALALGVLLGMAVNRRR
>Mature_97_residues
TTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAEVTKVTAAARDFAVKQPVATAA
GALALGVLLGMAVNRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10249; Mature: 10117

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAE
CCCCCCCCHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTKVTAAARDFAVKQPVATAAGALALGVLLGMAVNRRR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAE
CCCCCCCHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTKVTAAARDFAVKQPVATAAGALALGVLLGMAVNRRR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA