| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679725
Identifier: 110679725
GI number: 110679725
Start: 2362266
End: 2362562
Strand: Direct
Name: 110679725
Synonym: RD1_2482
Alternate gene names: NA
Gene position: 2362266-2362562 (Clockwise)
Preceding gene: 110679724
Following gene: 110679726
Centisome position: 57.15
GC content: 60.61
Gene sequence:
>297_bases ATGACAACCATACACTCAGCCGACCCCGAAATGCTTAGCAACGCATCTGTAGACACAAAAGACAAGCGGCGCGGACCAGA CGCGAAAGAGGCGACTGAAGCCGCGCGTGATTACGCCATGCAAACCTCCACTGCGGCGATGGAAACGGCCGAAGCAGTTG CTTCCGACGTGCGCGCCGAAGTAACGAAAGTCACCGCCGCCGCGCGCGATTTTGCGGTCAAACAGCCAGTGGCAACGGCA GCAGGGGCGTTGGCGCTTGGCGTGCTTCTGGGTATGGCGGTCAACCGGCGTCGCTAA
Upstream 100 bases:
>100_bases CGCAGCGGCATTGAGGCCGGGTACGAGCAAATCCGGCCGCACTAGGCGCCGCGATGCCTTCCGGCACGCACCATGACACA TATTTTCAAGGAGACCACTG
Downstream 100 bases:
>100_bases GGGAACTTGCATTCGCTGCAACTCAACGCCAGCGTGTCCCTGTTTTTACGATGACCCCGCGCTGTGCTGGAATCCTGCGC ACATCCTCATAAGAAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAEVTKVTAAARDFAVKQPVATA AGALALGVLLGMAVNRRR
Sequences:
>Translated_98_residues MTTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAEVTKVTAAARDFAVKQPVATA AGALALGVLLGMAVNRRR >Mature_97_residues TTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAEVTKVTAAARDFAVKQPVATAA GALALGVLLGMAVNRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10249; Mature: 10117
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAE CCCCCCCCHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTKVTAAARDFAVKQPVATAAGALALGVLLGMAVNRRR HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTIHSADPEMLSNASVDTKDKRRGPDAKEATEAARDYAMQTSTAAMETAEAVASDVRAE CCCCCCCHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTKVTAAARDFAVKQPVATAAGALALGVLLGMAVNRRR HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA