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The map label for this gene is 110679724

Identifier: 110679724

GI number: 110679724

Start: 2361449

End: 2362210

Strand: Direct

Name: 110679724

Synonym: RD1_2481

Alternate gene names: NA

Gene position: 2361449-2362210 (Clockwise)

Preceding gene: 110679723

Following gene: 110679725

Centisome position: 57.14

GC content: 64.04

Gene sequence:

>762_bases
ATGTCTGACGACGTCCAGGATCTCGAACGAAACATCCAGGTAGAGCGGACCATGCTGGACCGCACCCTGTCCCAATTGTC
GGATGCATTGTCGCCCGAACGGATATCGAGCACCGTGGCGCGGGAGGTCCAAGCCCGTGGTGGTGCGCTCGGTCACACGG
TGGTGGATGCCGCCCGTGCCAATCCAGCAGGCGCCATGTTGGTGGGTGCGGGCCTCGTCGCTCTGCTTGCCGGTCCAAAA
CGCCCCGCGCCGGAGCCTGCGTATGACACACGACACAAACCGGTCTCTCGCGGTATGTCGCGCTCTGATCCATTGACGGA
AGAGTTTGATCGGCGTGTAGATGCGGCCACCTCGGCCCAAGATGATGCGCCGCGTGCGCCAAGGATGCGCGCGGCACTGA
ACAAAGGTTTGGCCCATCTGCCAGCCCCAGCCCGGCAGCGTGTCATAAGAGTTCGCGAAGCTGCGATCGACGCACAGGAA
CGGCTGGATCGTCAGGCGGCGATCGCCAAGCGAAAGGCGCAGAGTTTTCATCACCGTCAGCCTTTCTCGACCGCGGCGCT
GGCCGTCGGTGCAGGCGCATTGCTCGCCGCGTTTTTGCCACGGACCCGCACGGAGGATGCGTTGCTGGGCTCAAAGCGTG
ACGCTTTGATGCAGCAAGCCGAACTGACCCTGCGCGACGAAATCGCCGCGGCAACAGCCACCGGTGAAGCGGCGCTGCGC
AGCGGCATTGAGGCCGGGTACGAGCAAATCCGGCCGCACTAG

Upstream 100 bases:

>100_bases
TTTTTCGCGGGGAAATCGCGACTTGCATCGAAAAACCTGAAGCTGAAGAAAACTGCGCGGAACCTGCGCAAAGATGCCAA
CACGATCAAGGAGAATGCCC

Downstream 100 bases:

>100_bases
GCGCCGCGATGCCTTCCGGCACGCACCATGACACATATTTTCAAGGAGACCACTGATGACAACCATACACTCAGCCGACC
CCGAAATGCTTAGCAACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSDDVQDLERNIQVERTMLDRTLSQLSDALSPERISSTVAREVQARGGALGHTVVDAARANPAGAMLVGAGLVALLAGPK
RPAPEPAYDTRHKPVSRGMSRSDPLTEEFDRRVDAATSAQDDAPRAPRMRAALNKGLAHLPAPARQRVIRVREAAIDAQE
RLDRQAAIAKRKAQSFHHRQPFSTAALAVGAGALLAAFLPRTRTEDALLGSKRDALMQQAELTLRDEIAAATATGEAALR
SGIEAGYEQIRPH

Sequences:

>Translated_253_residues
MSDDVQDLERNIQVERTMLDRTLSQLSDALSPERISSTVAREVQARGGALGHTVVDAARANPAGAMLVGAGLVALLAGPK
RPAPEPAYDTRHKPVSRGMSRSDPLTEEFDRRVDAATSAQDDAPRAPRMRAALNKGLAHLPAPARQRVIRVREAAIDAQE
RLDRQAAIAKRKAQSFHHRQPFSTAALAVGAGALLAAFLPRTRTEDALLGSKRDALMQQAELTLRDEIAAATATGEAALR
SGIEAGYEQIRPH
>Mature_252_residues
SDDVQDLERNIQVERTMLDRTLSQLSDALSPERISSTVAREVQARGGALGHTVVDAARANPAGAMLVGAGLVALLAGPKR
PAPEPAYDTRHKPVSRGMSRSDPLTEEFDRRVDAATSAQDDAPRAPRMRAALNKGLAHLPAPARQRVIRVREAAIDAQER
LDRQAAIAKRKAQSFHHRQPFSTAALAVGAGALLAAFLPRTRTEDALLGSKRDALMQQAELTLRDEIAAATATGEAALRS
GIEAGYEQIRPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27180; Mature: 27049

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDVQDLERNIQVERTMLDRTLSQLSDALSPERISSTVAREVQARGGALGHTVVDAARA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
NPAGAMLVGAGLVALLAGPKRPAPEPAYDTRHKPVSRGMSRSDPLTEEFDRRVDAATSAQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCC
DDAPRAPRMRAALNKGLAHLPAPARQRVIRVREAAIDAQERLDRQAAIAKRKAQSFHHRQ
CCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PFSTAALAVGAGALLAAFLPRTRTEDALLGSKRDALMQQAELTLRDEIAAATATGEAALR
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGIEAGYEQIRPH
HHHHHHHHHHCCC
>Mature Secondary Structure 
SDDVQDLERNIQVERTMLDRTLSQLSDALSPERISSTVAREVQARGGALGHTVVDAARA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
NPAGAMLVGAGLVALLAGPKRPAPEPAYDTRHKPVSRGMSRSDPLTEEFDRRVDAATSAQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCC
DDAPRAPRMRAALNKGLAHLPAPARQRVIRVREAAIDAQERLDRQAAIAKRKAQSFHHRQ
CCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PFSTAALAVGAGALLAAFLPRTRTEDALLGSKRDALMQQAELTLRDEIAAATATGEAALR
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGIEAGYEQIRPH
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA