| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is grxC [H]
Identifier: 110679609
GI number: 110679609
Start: 2251724
End: 2251996
Strand: Reverse
Name: grxC [H]
Synonym: RD1_2354
Alternate gene names: 110679609
Gene position: 2251996-2251724 (Counterclockwise)
Preceding gene: 110679610
Following gene: 110679607
Centisome position: 54.49
GC content: 63.0
Gene sequence:
>273_bases ATGCCCCCTGAAATCACACTCTACACCAAGGGCTATTGCCCCCATTGCAAAGCCGCCCGCGCCCTGCTGAGCGCCAAAGG CGTGCGCTTCGTGAACCACGACATCGACATCACCCCGGAGCGGCGCGGCGAAATGATCGCCCGCGCCGGCGGGCGCACCA CCGTGCCGCAAATCTTCATCGCAGACTTCCACGTCGGCGGAAACAGCGACCTCACCGCCCTCAACTCATCAGGCACCCTC GACGCGCTGCTCAATATCAAACAACCAGCGTGA
Upstream 100 bases:
>100_bases CGCGCTGTTCTTGTCCGGTGACGCCCTGCGCCGCATCGCCCGCAGCTGACCCATCACCGCCCCCGCCAATGCGGCGGGGG CGCAGACCCGGAGACACCCC
Downstream 100 bases:
>100_bases AACCACTGCACGCACAGGATGCGCCCTGCCCGGCAGAGCGCATCTTTCACGTCTTGATCGGCATCTCAATTAGGTTTGTG CGGAACGCGGCGCAAACCAT
Product: glutaredoxin 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MPPEITLYTKGYCPHCKAARALLSAKGVRFVNHDIDITPERRGEMIARAGGRTTVPQIFIADFHVGGNSDLTALNSSGTL DALLNIKQPA
Sequences:
>Translated_90_residues MPPEITLYTKGYCPHCKAARALLSAKGVRFVNHDIDITPERRGEMIARAGGRTTVPQIFIADFHVGGNSDLTALNSSGTL DALLNIKQPA >Mature_89_residues PPEITLYTKGYCPHCKAARALLSAKGVRFVNHDIDITPERRGEMIARAGGRTTVPQIFIADFHVGGNSDLTALNSSGTLD ALLNIKQPA
Specific function: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins [H]
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790039, Length=81, Percent_Identity=54.320987654321, Blast_Score=84, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011900 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 9691; Mature: 9560
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPEITLYTKGYCPHCKAARALLSAKGVRFVNHDIDITPERRGEMIARAGGRTTVPQIFI CCCCEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEE ADFHVGGNSDLTALNSSGTLDALLNIKQPA EEEEECCCCCEEEECCCCCEEEEEEECCCC >Mature Secondary Structure PPEITLYTKGYCPHCKAARALLSAKGVRFVNHDIDITPERRGEMIARAGGRTTVPQIFI CCCEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEE ADFHVGGNSDLTALNSSGTLDALLNIKQPA EEEEECCCCCEEEECCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]