Click here to switch to the map view.

The map label for this gene is 110679607

Identifier: 110679607

GI number: 110679607

Start: 2248077

End: 2250350

Strand: Reverse

Name: 110679607

Synonym: RD1_2352

Alternate gene names: NA

Gene position: 2250350-2248077 (Counterclockwise)

Preceding gene: 110679609

Following gene: 110679603

Centisome position: 54.45

GC content: 58.05

Gene sequence:

>2274_bases
ATGAATATACTTAGTCTCGGCGTCAGCCAGTCCACGACGGCCCCTCAGATCAAGATGTCAGTCGCATCTTCCTTTGACAC
GACTGCAATGCAGTTGAGACTGAGGCTTGCGCGGTTGCGCGCGGATGGGCCCGTTGATCTGACCTTATCGGAACTGACCC
TTGATGATCGTGATACAAGTGCCTTGCTGCGCGACGCGCCAACCAGCCCTGAACTCGCGGAAATGGTGAGCAGCCTTTCT
GCACCCTCAGAGGATGGCAGCACTGTCGCAGCACAACTGACGCAAACGCTGGAGGTTGGTGCGCGCTATCTTGTATCCTA
TGAAATTCGTGAAGCGGGCCCCTCGGCGCATGTCTATTTCCCCGCTTCTGGCTGCCCGTTTGACTTTGCGCACCTCAACG
CCGCGCCGGGGGTGCACAATCGCCTTGTGACAGCAACAAATGACACCGACACGACGCTCATGCATACCCAAGGCGACGTC
GTTTTGGGATTTGCGTCCTGCCGCAAGGCGGAATGGACCGTCGATCTGCCCCTGGGCACGTCGGGCGAAGAGCTCAGCAA
CACCACGGCAGGCCGCTTCAGCGGATCCGGCGCAGCCATAGCGACAGCATCGCGCGCTTTGACCACTGGTGAAGATTACG
TTCTTTTTTATGAAATCACAGAAGATGGCGGCTCAAACGGGCTGTTCACGGCGATCAATGGCCCGTTCGGCTTTCGCCAA
CTCCCCCGGAGCGTCGGTGTGCACAACGTGATCCTGACCTGCCGTAATGAGGGGTTGAACCCGTATTTGCGTATCAACGG
CGATCTGACCTTTGGGGTGATATCACTTCGCCAGCGTGGTCCGGATGCCGGTCGACGGATCAACTGGGAGGTCGGCGCGG
GGGAGCTGCGCCGCGCAGGCAAAGCCTATGTCCCTTCGGCGGATATCTATGTTGCGCCCACAGGCAGTGACAGCCTCGGA
ACCGGGGCGGCCACGAACCCCTACCAGAGCCCGGAATATGCCACATCCAGAGCCATGCCCGGTGACACGGTCTTTCTGCT
CCCCGGCGTCTACGATCCCTTCGAGGTGCAAGGCAGCGGCAGCCCCGGCAGCCCGCTTACCATCACGGCCCTGCCCGGCG
CGGAGCGGCAGGTCATCATACGGGGCGATTTACTGAGCCATGTGACCTATGGCGGCCCCGGTGTGCCTCAGAATAATGCC
ATGCGTGATGGCATTCGGATCGTGGGCAAAAACTACGTGGTGCTGCGGGGACTGACTGTGGAGTACTGCTGGCGCAATGG
CATCTTCATCGCGGGCAATGGCGAAAACACGATCACGGGCAACCATATTGTCGAGGATTGTTTCACGCAACACACCGGCC
TCAGTGGCATCCTCGCCTGCGGCGAACGGCCGGAACTGTCCGTGTCCCCCGATGATCCCTTTCGCACGCGTCAGATCATC
ATCCGCAACAATGAGGTGACACAGACCAATGTGGTCACCGATTACAATGATACGGTCACGAACTCCTTCGGCGAACCGGG
TGGCGTTGGCGAAGCGATCACCGTCGCCAATAGCGTGCAGCACGTTTTTGTTTACGGCAATACCGTCCACAACAGTCGCC
AATACGGAATCGACTTCAAGAATCACGTGGTTGATGGCGAGATTCATGGCAACCGGATTGACCGCGTCATCCGCTATGGG
ATTTATCTGGATGCGGGTGAAACCGATATTCGCAGAATCTCCGTCAGGGATAACGTGGTGACGCATTGTCGTGCGGGCAT
TGTTCTGTCGCGTGAAGAAGACGGCGACGACAGTGGCGACGGTCTTGTGTTCGAAGACATTGATATCGACAACAACACCC
TCGCCCATCTCTCGCGCATCGGTATTCACTTTCAGCGGCACCCCTCAAAGGACTTGCAGGACATTGGTCACATACGGCGC
ATCCGCGCACGGTTAAACACGCTTTACAACACGAACACGGACGGCTTTTACCGCGATCTCAACATTGATGACTGGGCGAC
ATTCGGCACCAATCTGGCCGGTGAACCGATCTTGGAGGGAATCGAATTGCGCGGCAATATCGCGTGGAACCCGGATGGCG
AGATGCGCATGAGGGTGGATGTGGCAGGTGATCCGCGGTTTACAGTGGTCGATAATTTCAATGTTGCGGACGGGCAAACC
ACCGGCATCGACCCTTTGTTCACCGATCCCCTGAACGGTGATTTTACATTGCAAACGGGATCCCCTGCCGAGGCGATGGT
CAGGCGCGTGCGCCTTGCCTTGGGGTTGGAATGA

Upstream 100 bases:

>100_bases
TGCATGCCTTGCCTGCGCGACCACTGCGACACGAATGACCCGTCGGTGCCCTGGCACCCTTTGTAAACAGAACAACGGCA
ATGTTTAGGACTTATAATCC

Downstream 100 bases:

>100_bases
AGCGCCCGGACTTGCGATCCGCACCGCTTTAATAAATCGCCGTAATTTATTGTTATCGTGACAGATTATATGCGGCTATT
TATTCGCTCCATGCGCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MNILSLGVSQSTTAPQIKMSVASSFDTTAMQLRLRLARLRADGPVDLTLSELTLDDRDTSALLRDAPTSPELAEMVSSLS
APSEDGSTVAAQLTQTLEVGARYLVSYEIREAGPSAHVYFPASGCPFDFAHLNAAPGVHNRLVTATNDTDTTLMHTQGDV
VLGFASCRKAEWTVDLPLGTSGEELSNTTAGRFSGSGAAIATASRALTTGEDYVLFYEITEDGGSNGLFTAINGPFGFRQ
LPRSVGVHNVILTCRNEGLNPYLRINGDLTFGVISLRQRGPDAGRRINWEVGAGELRRAGKAYVPSADIYVAPTGSDSLG
TGAATNPYQSPEYATSRAMPGDTVFLLPGVYDPFEVQGSGSPGSPLTITALPGAERQVIIRGDLLSHVTYGGPGVPQNNA
MRDGIRIVGKNYVVLRGLTVEYCWRNGIFIAGNGENTITGNHIVEDCFTQHTGLSGILACGERPELSVSPDDPFRTRQII
IRNNEVTQTNVVTDYNDTVTNSFGEPGGVGEAITVANSVQHVFVYGNTVHNSRQYGIDFKNHVVDGEIHGNRIDRVIRYG
IYLDAGETDIRRISVRDNVVTHCRAGIVLSREEDGDDSGDGLVFEDIDIDNNTLAHLSRIGIHFQRHPSKDLQDIGHIRR
IRARLNTLYNTNTDGFYRDLNIDDWATFGTNLAGEPILEGIELRGNIAWNPDGEMRMRVDVAGDPRFTVVDNFNVADGQT
TGIDPLFTDPLNGDFTLQTGSPAEAMVRRVRLALGLE

Sequences:

>Translated_757_residues
MNILSLGVSQSTTAPQIKMSVASSFDTTAMQLRLRLARLRADGPVDLTLSELTLDDRDTSALLRDAPTSPELAEMVSSLS
APSEDGSTVAAQLTQTLEVGARYLVSYEIREAGPSAHVYFPASGCPFDFAHLNAAPGVHNRLVTATNDTDTTLMHTQGDV
VLGFASCRKAEWTVDLPLGTSGEELSNTTAGRFSGSGAAIATASRALTTGEDYVLFYEITEDGGSNGLFTAINGPFGFRQ
LPRSVGVHNVILTCRNEGLNPYLRINGDLTFGVISLRQRGPDAGRRINWEVGAGELRRAGKAYVPSADIYVAPTGSDSLG
TGAATNPYQSPEYATSRAMPGDTVFLLPGVYDPFEVQGSGSPGSPLTITALPGAERQVIIRGDLLSHVTYGGPGVPQNNA
MRDGIRIVGKNYVVLRGLTVEYCWRNGIFIAGNGENTITGNHIVEDCFTQHTGLSGILACGERPELSVSPDDPFRTRQII
IRNNEVTQTNVVTDYNDTVTNSFGEPGGVGEAITVANSVQHVFVYGNTVHNSRQYGIDFKNHVVDGEIHGNRIDRVIRYG
IYLDAGETDIRRISVRDNVVTHCRAGIVLSREEDGDDSGDGLVFEDIDIDNNTLAHLSRIGIHFQRHPSKDLQDIGHIRR
IRARLNTLYNTNTDGFYRDLNIDDWATFGTNLAGEPILEGIELRGNIAWNPDGEMRMRVDVAGDPRFTVVDNFNVADGQT
TGIDPLFTDPLNGDFTLQTGSPAEAMVRRVRLALGLE
>Mature_757_residues
MNILSLGVSQSTTAPQIKMSVASSFDTTAMQLRLRLARLRADGPVDLTLSELTLDDRDTSALLRDAPTSPELAEMVSSLS
APSEDGSTVAAQLTQTLEVGARYLVSYEIREAGPSAHVYFPASGCPFDFAHLNAAPGVHNRLVTATNDTDTTLMHTQGDV
VLGFASCRKAEWTVDLPLGTSGEELSNTTAGRFSGSGAAIATASRALTTGEDYVLFYEITEDGGSNGLFTAINGPFGFRQ
LPRSVGVHNVILTCRNEGLNPYLRINGDLTFGVISLRQRGPDAGRRINWEVGAGELRRAGKAYVPSADIYVAPTGSDSLG
TGAATNPYQSPEYATSRAMPGDTVFLLPGVYDPFEVQGSGSPGSPLTITALPGAERQVIIRGDLLSHVTYGGPGVPQNNA
MRDGIRIVGKNYVVLRGLTVEYCWRNGIFIAGNGENTITGNHIVEDCFTQHTGLSGILACGERPELSVSPDDPFRTRQII
IRNNEVTQTNVVTDYNDTVTNSFGEPGGVGEAITVANSVQHVFVYGNTVHNSRQYGIDFKNHVVDGEIHGNRIDRVIRYG
IYLDAGETDIRRISVRDNVVTHCRAGIVLSREEDGDDSGDGLVFEDIDIDNNTLAHLSRIGIHFQRHPSKDLQDIGHIRR
IRARLNTLYNTNTDGFYRDLNIDDWATFGTNLAGEPILEGIELRGNIAWNPDGEMRMRVDVAGDPRFTVVDNFNVADGQT
TGIDPLFTDPLNGDFTLQTGSPAEAMVRRVRLALGLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81820; Mature: 81820

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILSLGVSQSTTAPQIKMSVASSFDTTAMQLRLRLARLRADGPVDLTLSELTLDDRDTS
CCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHH
ALLRDAPTSPELAEMVSSLSAPSEDGSTVAAQLTQTLEVGARYLVSYEIREAGPSAHVYF
HHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEEEHHHCCCCEEEEE
PASGCPFDFAHLNAAPGVHNRLVTATNDTDTTLMHTQGDVVLGFASCRKAEWTVDLPLGT
CCCCCCCCHHHCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECCCCCCCEEEECCCCC
SGEELSNTTAGRFSGSGAAIATASRALTTGEDYVLFYEITEDGGSNGLFTAINGPFGFRQ
CCHHHCCCCCCCCCCCCCEEEECCCEEECCCCEEEEEEEECCCCCCCEEEEECCCCCHHH
LPRSVGVHNVILTCRNEGLNPYLRINGDLTFGVISLRQRGPDAGRRINWEVGAGELRRAG
HHHHCCCEEEEEEEECCCCCCEEEECCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHCC
KAYVPSADIYVAPTGSDSLGTGAATNPYQSPEYATSRAMPGDTVFLLPGVYDPFEVQGSG
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCEEEECCC
SPGSPLTITALPGAERQVIIRGDLLSHVTYGGPGVPQNNAMRDGIRIVGKNYVVLRGLTV
CCCCCEEEEECCCCCCEEEEECCHHHHHCCCCCCCCCCCCHHCCEEEECCCEEEEECCEE
EYCWRNGIFIAGNGENTITGNHIVEDCFTQHTGLSGILACGERPELSVSPDDPFRTRQII
EEEECCCEEEEECCCCCEECCHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCCEEEEE
IRNNEVTQTNVVTDYNDTVTNSFGEPGGVGEAITVANSVQHVFVYGNTVHNSRQYGIDFK
EECCCEEEEEEEECCCCHHHCCCCCCCCCCCEEEEECCCEEEEEECCEEECCCCCCCCHH
NHVVDGEIHGNRIDRVIRYGIYLDAGETDIRRISVRDNVVTHCRAGIVLSREEDGDDSGD
HEEECCEECCHHHHHEEEEEEEEECCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCCCC
GLVFEDIDIDNNTLAHLSRIGIHFQRHPSKDLQDIGHIRRIRARLNTLYNTNTDGFYRDL
CEEEEEECCCCCHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
NIDDWATFGTNLAGEPILEGIELRGNIAWNPDGEMRMRVDVAGDPRFTVVDNFNVADGQT
CCCCHHHCCCCCCCCHHHCCEEEECEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCC
TGIDPLFTDPLNGDFTLQTGSPAEAMVRRVRLALGLE
CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNILSLGVSQSTTAPQIKMSVASSFDTTAMQLRLRLARLRADGPVDLTLSELTLDDRDTS
CCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHH
ALLRDAPTSPELAEMVSSLSAPSEDGSTVAAQLTQTLEVGARYLVSYEIREAGPSAHVYF
HHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEEEHHHCCCCEEEEE
PASGCPFDFAHLNAAPGVHNRLVTATNDTDTTLMHTQGDVVLGFASCRKAEWTVDLPLGT
CCCCCCCCHHHCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECCCCCCCEEEECCCCC
SGEELSNTTAGRFSGSGAAIATASRALTTGEDYVLFYEITEDGGSNGLFTAINGPFGFRQ
CCHHHCCCCCCCCCCCCCEEEECCCEEECCCCEEEEEEEECCCCCCCEEEEECCCCCHHH
LPRSVGVHNVILTCRNEGLNPYLRINGDLTFGVISLRQRGPDAGRRINWEVGAGELRRAG
HHHHCCCEEEEEEEECCCCCCEEEECCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHCC
KAYVPSADIYVAPTGSDSLGTGAATNPYQSPEYATSRAMPGDTVFLLPGVYDPFEVQGSG
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCEEEECCC
SPGSPLTITALPGAERQVIIRGDLLSHVTYGGPGVPQNNAMRDGIRIVGKNYVVLRGLTV
CCCCCEEEEECCCCCCEEEEECCHHHHHCCCCCCCCCCCCHHCCEEEECCCEEEEECCEE
EYCWRNGIFIAGNGENTITGNHIVEDCFTQHTGLSGILACGERPELSVSPDDPFRTRQII
EEEECCCEEEEECCCCCEECCHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCCEEEEE
IRNNEVTQTNVVTDYNDTVTNSFGEPGGVGEAITVANSVQHVFVYGNTVHNSRQYGIDFK
EECCCEEEEEEEECCCCHHHCCCCCCCCCCCEEEEECCCEEEEEECCEEECCCCCCCCHH
NHVVDGEIHGNRIDRVIRYGIYLDAGETDIRRISVRDNVVTHCRAGIVLSREEDGDDSGD
HEEECCEECCHHHHHEEEEEEEEECCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCCCC
GLVFEDIDIDNNTLAHLSRIGIHFQRHPSKDLQDIGHIRRIRARLNTLYNTNTDGFYRDL
CEEEEEECCCCCHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
NIDDWATFGTNLAGEPILEGIELRGNIAWNPDGEMRMRVDVAGDPRFTVVDNFNVADGQT
CCCCHHHCCCCCCCCHHHCCEEEECEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCC
TGIDPLFTDPLNGDFTLQTGSPAEAMVRRVRLALGLE
CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA