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The map label for this gene is ykgB [H]

Identifier: 110679610

GI number: 110679610

Start: 2252048

End: 2252548

Strand: Reverse

Name: ykgB [H]

Synonym: RD1_2355

Alternate gene names: 110679610

Gene position: 2252548-2252048 (Counterclockwise)

Preceding gene: 110679613

Following gene: 110679609

Centisome position: 54.5

GC content: 66.67

Gene sequence:

>501_bases
ATGACACATGTCACAGAAACCCCCGCCGCCGCCGTGAACCTCGCCGATCTGGGCGACACCGTGGCGAATGCGGGCACCCA
TGCGATCCGCTTTTCCAGCGCGATCGTGCTGGGCTGGATCGGCGCGATGAAATTCACCGCCTATGAGGCGGGCGCCATCG
AGGGTCTGGTCGCCTCCAGCCCGCTGACCAGCTGGCTCTATTCGGTGTTTTCGCTGCAGGGGGCGTCGAACCTGATCGGA
TCCGCCGAGATCGCGATTGCCCTGCTGCTGGTGGTGGGTGCGAAATTTCCCAAGGTGGCGCTGCTGGGGGCCCTGGGCGC
GCTGGCGACCTTCTTTGTGACGGCCAGCTTCCTGTTCACCGCGCCCGTGACCGAGCCGAGCCTCGGCGGCTTTCCCGCGC
TATCGGTCGTGCCGGGCCAGTTCCTGCTCAAAGACATCGTCCTGCTGGCCGCCGCGCTGTTCTTGTCCGGTGACGCCCTG
CGCCGCATCGCCCGCAGCTGA

Upstream 100 bases:

>100_bases
TTGACCGATTGGTCCGTAATCTCTAGGTGTTGGTCATCGGCACTGACGCCGCACAGCTTTACCCAAATAAAGACCACTCG
GTCAAGAAAGGAAACACATC

Downstream 100 bases:

>100_bases
CCCATCACCGCCCCCGCCAATGCGGCGGGGGCGCAGACCCGGAGACACCCCATGCCCCCTGAAATCACACTCTACACCAA
GGGCTATTGCCCCCATTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTHVTETPAAAVNLADLGDTVANAGTHAIRFSSAIVLGWIGAMKFTAYEAGAIEGLVASSPLTSWLYSVFSLQGASNLIG
SAEIAIALLLVVGAKFPKVALLGALGALATFFVTASFLFTAPVTEPSLGGFPALSVVPGQFLLKDIVLLAAALFLSGDAL
RRIARS

Sequences:

>Translated_166_residues
MTHVTETPAAAVNLADLGDTVANAGTHAIRFSSAIVLGWIGAMKFTAYEAGAIEGLVASSPLTSWLYSVFSLQGASNLIG
SAEIAIALLLVVGAKFPKVALLGALGALATFFVTASFLFTAPVTEPSLGGFPALSVVPGQFLLKDIVLLAAALFLSGDAL
RRIARS
>Mature_165_residues
THVTETPAAAVNLADLGDTVANAGTHAIRFSSAIVLGWIGAMKFTAYEAGAIEGLVASSPLTSWLYSVFSLQGASNLIGS
AEIAIALLLVVGAKFPKVALLGALGALATFFVTASFLFTAPVTEPSLGGFPALSVVPGQFLLKDIVLLAAALFLSGDALR
RIARS

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081715, Length=184, Percent_Identity=35.8695652173913, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007339 [H]

Pfam domain/function: PF04224 DUF417 [H]

EC number: NA

Molecular weight: Translated: 16949; Mature: 16818

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHVTETPAAAVNLADLGDTVANAGTHAIRFSSAIVLGWIGAMKFTAYEAGAIEGLVASS
CCCCCCCCHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PLTSWLYSVFSLQGASNLIGSAEIAIALLLVVGAKFPKVALLGALGALATFFVTASFLFT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
APVTEPSLGGFPALSVVPGQFLLKDIVLLAAALFLSGDALRRIARS
CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
THVTETPAAAVNLADLGDTVANAGTHAIRFSSAIVLGWIGAMKFTAYEAGAIEGLVASS
CCCCCCCHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PLTSWLYSVFSLQGASNLIGSAEIAIALLLVVGAKFPKVALLGALGALATFFVTASFLFT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
APVTEPSLGGFPALSVVPGQFLLKDIVLLAAALFLSGDALRRIARS
CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]