| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is tauC [C]
Identifier: 110679597
GI number: 110679597
Start: 2240339
End: 2241871
Strand: Reverse
Name: tauC [C]
Synonym: RD1_2342
Alternate gene names: 110679597
Gene position: 2241871-2240339 (Counterclockwise)
Preceding gene: 110679598
Following gene: 110679596
Centisome position: 54.24
GC content: 63.6
Gene sequence:
>1533_bases ATGTCCATTCGGCGCGGCACAATCGCAGCGGTTGTGCTGCTGGGTCTTTGGGAAGGGGCGGCGCAGGTCCTTTCGGATGG CGTGTTATTCGTCGGCCCCCTCGGGATCCTGTTCCATATCGGCGCAAACCCCGGTCTTTTGGTCCGCGCCACGGCCACCA CGACCCAGAATGCCGCGCTCGGGTTCCTCTGGGGAAACCTTGCTGCCGTCCTCATGGCCAGTGTCGTGGTTGTGCTGCCG CGCACGGAGCGGGTGATTTCCTCTGCCGCCCTTGTGGTGTTCTGCCTGCCGCTTGTGGCAACCGGGCCGATCCTGCGCGT CATTTCAGGCCCCGGCGATACGCCACAGATCGCCCTCGCAGCGCTGGCGGTCTATTACACGACATTCCTTGCAATGCGTG TGGGGTTGCGTGCGATGCCGGCCAACTGGTCCGACCTGATGTCTGTTTACGGGCGGGGGGCCCTGGCGACCCTTCTCACC GTGCGTGCACGCGCCAGCCTGCCCTATTTGTTTGTCGGCCTGCAGATCGCGGCCCCCGCCGCCTTTCTCGGCGCGATGAT CGGAGAGTTCACGGGCGCCGAACGCGGCCTTGGCGTGCTGACGCTGCGGGCGATGCGCAGCTTGGATGTCGAGGCCACAT GGTCACTTGCGGTGATTTCCGCCGCCATGGCGATGCTGCTTTATGCACTGGTGGGAGCAGCGGGGCGTTGGCTTGTCGGA TACACCCCTGACATCATCCTGTCCCCGCCCCGCACGATGGCGCACAACCGCTGGACGGGGATGCTTCAGGCATGTGGCGC GGCACTGCTGTTGATCCTGCTGTGGCAGATCAGCATGGATCTGGCAGACCTCAACCGTTTCTTTGCAAAACGCCCAGCAG ATGTGCTGAGCTATCTGCTTGCCGATGCCCCGGCCCGCGCCACATTGCTGCGCGCGCTGGCAGAGACAACGGCGACCACG ATCCCCGGTTATCTTGCCGGGCTGGTGCTGGGGGCCGCACTTGCGATGGGCGTCATCCTTCTTCCCAGGGCCTCAGGTGT CGTTTTGCCCGTGGCCGTCGCCTTGCGCGCGATCCCCATTATCACCACCGCACCGCTGATCGTGCTGGCGCTGGGGCGCG GCGCGACCGGCACGATCGCGGTCATTGCGGTGATGATCTTTTTCCCGACATTCGTGGCCTGCCTGCAGGGGTTGCGGCAA ACGCCTCGGGCCGTGAGCGACCTTTTTCGCAGCTATGGCGCCGGCCCCGTGACCGTCCTGTACCTCGCCCAGATCCCGGG CATGCTGCCTGCATTCTTTGCTGCGGCGAAAATGGCGGTGCCTGCCGCCATTCTGGCCGTCACAACGACGGAATGGCTGG TCACGGGCAAAGGGATCGGGCTGTTGGTGGCCTTGACCTCCACCACCTCCAACTACAATATGTTGTGGTCCTGCATCGTT GCGACAACGGTGCTTGCGGTCGTGATCTATGCGGTTGTGGTCCGGGTGGAGCGCGTGGTTTTATCAAAATATGCAAGTGA ACAGGTGATATGA
Upstream 100 bases:
>100_bases GGTGATCTTTGAGCCCCCGCGCGGCATCTCCGTCACGCGGTTGCCGGCGTTTCAATCCAAAACCAAAGAGGTGCTCGACG CCCTTGGGGTCATCCTCTGA
Downstream 100 bases:
>100_bases CACGGGCGGTCTTTGCAATTCCGGGCGACAAGGATCGCAGAACCGGCGGCTTTCTCTATGAGGCCACGGTGTTGCGTGTG CTCAACGATATGGGGTTTGA
Product: ABC transporter, permease protein, putative
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MSIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAALGFLWGNLAAVLMASVVVVLP RTERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALAALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLT VRARASLPYLFVGLQIAAPAAFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVG YTPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLLADAPARATLLRALAETTATT IPGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPIITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQ TPRAVSDLFRSYGAGPVTVLYLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIV ATTVLAVVIYAVVVRVERVVLSKYASEQVI
Sequences:
>Translated_510_residues MSIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAALGFLWGNLAAVLMASVVVVLP RTERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALAALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLT VRARASLPYLFVGLQIAAPAAFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVG YTPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLLADAPARATLLRALAETTATT IPGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPIITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQ TPRAVSDLFRSYGAGPVTVLYLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIV ATTVLAVVIYAVVVRVERVVLSKYASEQVI >Mature_509_residues SIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAALGFLWGNLAAVLMASVVVVLPR TERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALAALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLTV RARASLPYLFVGLQIAAPAAFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVGY TPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLLADAPARATLLRALAETTATTI PGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPIITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQT PRAVSDLFRSYGAGPVTVLYLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIVA TTVLAVVIYAVVVRVERVVLSKYASEQVI
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 53333; Mature: 53201
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAAL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHEEECCCCCEEEEEECCCCCCCHH GFLWGNLAAVLMASVVVVLPRTERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHH ALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLTVRARASLPYLFVGLQIAAPA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHH AFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVG HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE YTPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLL CCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ADAPARATLLRALAETTATTIPGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQTPRAVSDLFRSYGAGPVTVL HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH YLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCHHHHHHHHH ATTVLAVVIYAVVVRVERVVLSKYASEQVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIRRGTIAAVVLLGLWEGAAQVLSDGVLFVGPLGILFHIGANPGLLVRATATTTQNAAL CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHEEECCCCCEEEEEECCCCCCCHH GFLWGNLAAVLMASVVVVLPRTERVISSAALVVFCLPLVATGPILRVISGPGDTPQIALA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHH ALAVYYTTFLAMRVGLRAMPANWSDLMSVYGRGALATLLTVRARASLPYLFVGLQIAAPA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHH AFLGAMIGEFTGAERGLGVLTLRAMRSLDVEATWSLAVISAAMAMLLYALVGAAGRWLVG HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE YTPDIILSPPRTMAHNRWTGMLQACGAALLLILLWQISMDLADLNRFFAKRPADVLSYLL CCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ADAPARATLLRALAETTATTIPGYLAGLVLGAALAMGVILLPRASGVVLPVAVALRAIPI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ITTAPLIVLALGRGATGTIAVIAVMIFFPTFVACLQGLRQTPRAVSDLFRSYGAGPVTVL HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH YLAQIPGMLPAFFAAAKMAVPAAILAVTTTEWLVTGKGIGLLVALTSTTSNYNMLWSCIV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCHHHHHHHHH ATTVLAVVIYAVVVRVERVVLSKYASEQVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]