| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is yexA [H]
Identifier: 110679528
GI number: 110679528
Start: 2163527
End: 2163787
Strand: Direct
Name: yexA [H]
Synonym: RD1_2263
Alternate gene names: 110679528
Gene position: 2163527-2163787 (Clockwise)
Preceding gene: 110679527
Following gene: 110679529
Centisome position: 52.35
GC content: 57.85
Gene sequence:
>261_bases GTGCGTCCGGGGCGCACAGAAGGACGAGACATGAAAGCACGAGTACATGTTATGCTGAAAAACGGTGTGCTGGACCCGCA GGGCGAAGCAGTGCGCCACGCCTTGGGGGCCATGGGATTTGAAGGTATCAATGGCGTGCGACAGGGCAAGGTCATCGAGC TTGATCTGGCCGAAGGCACGACCGAAGCGGACGTGAGCGCGATGTGTGAAAAGCTGCTGGCCAATACGGTGATCGAATCC TACTCGGTGGAGATTTCCTGA
Upstream 100 bases:
>100_bases GGCCGATGCCTATACCGAAGTGGCGCAGCGTCTGGGCGTGATGCCCAAGAACGCCACGCCGATCACAAAACCGACCCTGA TCAACTAACCCCGGGAAACA
Downstream 100 bases:
>100_bases TGCACGCGGCGGTCGTTGTCTTTCCCGGGTCCAACTGTGATCGCGATCTTGCCGTCGCCTTTGAGGCGGCTGGCGCACAG GTCACCAAGGTCTGGCACAA
Product: phosphoribosylformylglycinamidine synthase, PurS protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGTTEADVSAMCEKLLANTVIES YSVEIS
Sequences:
>Translated_86_residues MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGTTEADVSAMCEKLLANTVIES YSVEIS >Mature_86_residues MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGTTEADVSAMCEKLLANTVIES YSVEIS
Specific function: Unknown
COG id: COG1828
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0062 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003850 - ProDom: PD010362 [H]
Pfam domain/function: PF02700 PurS [H]
EC number: NA
Molecular weight: Translated: 9256; Mature: 9256
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGT CCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC TEADVSAMCEKLLANTVIESYSVEIS CCCCHHHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure MRPGRTEGRDMKARVHVMLKNGVLDPQGEAVRHALGAMGFEGINGVRQGKVIELDLAEGT CCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC TEADVSAMCEKLLANTVIESYSVEIS CCCCHHHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]