| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is suhB [H]
Identifier: 110679480
GI number: 110679480
Start: 2110796
End: 2111575
Strand: Direct
Name: suhB [H]
Synonym: RD1_2209
Alternate gene names: 110679480
Gene position: 2110796-2111575 (Clockwise)
Preceding gene: 110679479
Following gene: 110679485
Centisome position: 51.07
GC content: 58.97
Gene sequence:
>780_bases GTGAACAATCGAAGTCAGGCAGCCGTTGAAATTGCGCGGATCGGGGGCGAACTGGCGCTGGAGTATTTTCGACGCCTCGG ATCACTCGTGATCGAAGACAAGGGCCCGCAGGACTTTGTATCCGAGGCTGACAAAGCGGTTGAAACACATATTCGCAACC TGATCACCGCCGCTTTCCCGGATGATGGGATCGTTGGTGAGGAGGATGCGCCAAAGCCATCCACGACGGGGTACACTTGG GTCATTGACCCGATTGACGGGACCACAAATTTCATCTCCGGCATTCCGGCGTGGACGGTGGTGCTGGCTGTCGTGTGCGA GGACAGCACGCAGATCGGTGTGATCTTTGATCCGGTGCATAACGAGATGTTCGTGGCCAATCGCGGTGCGGGGGCCACTC TGAATGGTGCGCCCATGGCCTGTGCGAGCGATGCGCCGATTACCCGTGGGACCGTTGGCACCGGCTATTCAAGCCGGATT TCCGCGCAGGCCTCTGCCGAGGTCGTGCTGGCCATTCTGGAAAAGGGTGGCGTGTTTCATCGCAATGCATCGGGCGCGCT GTCGCTGGCCTATGTGGCGTCGGGACGGTTGCTTGGGTATATCGAAGAGCACATGAACGCCTGGGATTGTCTGGCCGGAC AGCTGCTGATTGCCGAAGCCGGTGGGCAGATCGAGGATCAAAGCGCCAACCAGATGATTGCACAGGGTGGACGCGTGATC GCTGGCGGAAGTGCGGTTTTCGATGACCTGTTGAAGATCGCGGATACCGCCTACAAGTAG
Upstream 100 bases:
>100_bases CCGCCGAGTGATAAAATCTCTTTGATTTCAGCGGATAAACGGTGGACCAGAAGCCCATTCACTGTAAGGGTCGCACCAAT TGTATTGAAGGAGAGTGACC
Downstream 100 bases:
>100_bases CCTGCCGAGCACCGGGGCACGGTTTAGGGCGTCTGACGAAATACCTGAAACATCAAGAAGCACGTAACGTGTTGAAACCT TTGTTTTCAGGCGGCGTTAC
Product: myo-inositol-1-monophosphotase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFPDDGIVGEEDAPKPSTTGYTW VIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVHNEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRI SAQASAEVVLAILEKGGVFHRNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI AGGSAVFDDLLKIADTAYK
Sequences:
>Translated_259_residues MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFPDDGIVGEEDAPKPSTTGYTW VIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVHNEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRI SAQASAEVVLAILEKGGVFHRNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI AGGSAVFDDLLKIADTAYK >Mature_259_residues MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFPDDGIVGEEDAPKPSTTGYTW VIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVHNEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRI SAQASAEVVLAILEKGGVFHRNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI AGGSAVFDDLLKIADTAYK
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=249, Percent_Identity=28.1124497991968, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI221625487, Length=249, Percent_Identity=28.1124497991968, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI7657236, Length=253, Percent_Identity=28.0632411067194, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI221625507, Length=136, Percent_Identity=33.0882352941176, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1788882, Length=247, Percent_Identity=35.2226720647773, Blast_Score=151, Evalue=5e-38, Organism=Caenorhabditis elegans, GI193202570, Length=253, Percent_Identity=29.2490118577075, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI193202572, Length=247, Percent_Identity=29.1497975708502, Blast_Score=114, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6320493, Length=199, Percent_Identity=34.6733668341709, Blast_Score=99, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6321836, Length=244, Percent_Identity=27.8688524590164, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI24664926, Length=231, Percent_Identity=29.8701298701299, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24664922, Length=207, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24664918, Length=219, Percent_Identity=32.4200913242009, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI21357957, Length=238, Percent_Identity=31.5126050420168, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI21357303, Length=221, Percent_Identity=29.8642533936652, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI21357329, Length=216, Percent_Identity=29.1666666666667, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 27171; Mature: 27171
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFP CCCCHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC DDGIVGEEDAPKPSTTGYTWVIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVH CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCC NEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRISAQASAEVVLAILEKGGVFH CEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCEEE RNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI ECCCCCEEEEEECCCHHHHHHHHHCCHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCEEE AGGSAVFDDLLKIADTAYK ECCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNRSQAAVEIARIGGELALEYFRRLGSLVIEDKGPQDFVSEADKAVETHIRNLITAAFP CCCCHHHHHHHHHHCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC DDGIVGEEDAPKPSTTGYTWVIDPIDGTTNFISGIPAWTVVLAVVCEDSTQIGVIFDPVH CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCC NEMFVANRGAGATLNGAPMACASDAPITRGTVGTGYSSRISAQASAEVVLAILEKGGVFH CEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCEEE RNASGALSLAYVASGRLLGYIEEHMNAWDCLAGQLLIAEAGGQIEDQSANQMIAQGGRVI ECCCCCEEEEEECCCHHHHHHHHHCCHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCEEE AGGSAVFDDLLKIADTAYK ECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]