Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679412

Identifier: 110679412

GI number: 110679412

Start: 2036612

End: 2036776

Strand: Direct

Name: 110679412

Synonym: RD1_2137

Alternate gene names: NA

Gene position: 2036612-2036776 (Clockwise)

Preceding gene: 110679411

Following gene: 110679413

Centisome position: 49.28

GC content: 53.94

Gene sequence:

>165_bases
ATGGCCATTCGCGCTGAACATGAAATCCATTCGCGCCGCAAAGGGCGCAATGTGGGCGTCGGCCTGATGCTGGCCGGATT
TGTCGTGCTTGTTCTGGCAATCACCTTTGCCAAGGTCACGAGCGATGATTTTGTTGTGCCAGATGCATCGGAGGTATCTA
ACTGA

Upstream 100 bases:

>100_bases
AAAGTTCTTCCGGCTGTCGCTGTGGTACTTGTTCGCGCATTTCGGGGCCATCCTGCTGGAATCGGCGCTGCGCCCCTTTG
GTTTGGGAGGCTGGTAAAAC

Downstream 100 bases:

>100_bases
TGGCCCTGAGAGGACCCGCAAAAACCGTAGCGCAAACCGTCAGCGTCGTGATTTTCATGGGCGCGCTGGCTTGGGCGTCG
GTGCCGCTTTATGACTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 54; Mature: 53

Protein sequence:

>54_residues
MAIRAEHEIHSRRKGRNVGVGLMLAGFVVLVLAITFAKVTSDDFVVPDASEVSN

Sequences:

>Translated_54_residues
MAIRAEHEIHSRRKGRNVGVGLMLAGFVVLVLAITFAKVTSDDFVVPDASEVSN
>Mature_53_residues
AIRAEHEIHSRRKGRNVGVGLMLAGFVVLVLAITFAKVTSDDFVVPDASEVSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5825; Mature: 5694

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRAEHEIHSRRKGRNVGVGLMLAGFVVLVLAITFAKVTSDDFVVPDASEVSN
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure 
AIRAEHEIHSRRKGRNVGVGLMLAGFVVLVLAITFAKVTSDDFVVPDASEVSN
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA