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The map label for this gene is ctaG

Identifier: 110679413

GI number: 110679413

Start: 2036776

End: 2037360

Strand: Direct

Name: ctaG

Synonym: RD1_2138

Alternate gene names: 110679413

Gene position: 2036776-2037360 (Clockwise)

Preceding gene: 110679412

Following gene: 110679414

Centisome position: 49.28

GC content: 56.75

Gene sequence:

>585_bases
ATGGCCCTGAGAGGACCCGCAAAAACCGTAGCGCAAACCGTCAGCGTCGTGATTTTCATGGGCGCGCTGGCTTGGGCGTC
GGTGCCGCTTTATGACTGGTTTTGCCGGGTGACCGGTTTCGGGGGCGTGACGGGTGTGTCCGATGTCGCGCCCGAGGATA
TCCTCGATCAAACCATCACCATTCGGTTTGACGGGTCGCTGAACAACCATATGCCGTGGGAATTCAAACCTGTCGTGCGC
GAGATGGACGTGCGCATCGGCGAATCCGGTCTGGCATTCTATGAGGCGTATAATCCGACCGACAGGCCCGTCGCCGGCTC
GGCAAGCTACAATGTGACCCCCTATCAGGCCGGTGGGTTTTTCAACAAGATCCAGTGCTTCTGCTTTGAAGAGCAGGTTC
TGCAACCCGGGGAGCGGGTGCAGATGCCCGTGACCTTCTATGTCGATCCGGAAATCGTGGACGACCGGGATGGCAAGCAT
GTCCACACGATCACGCTGTCATACACATTTTACGAAATCGACCTGCCCGAAGAATATGCCGACGCGCAGGACATCGAAGA
AAATTCAGACACAAGTCTGAACTGA

Upstream 100 bases:

>100_bases
TGATGCTGGCCGGATTTGTCGTGCTTGTTCTGGCAATCACCTTTGCCAAGGTCACGAGCGATGATTTTGTTGTGCCAGAT
GCATCGGAGGTATCTAACTG

Downstream 100 bases:

>100_bases
CCAACATAAGGTAAGGGACGAAACCATGGCGCATGAAAAGAACCATGACTATCACATTTTAAACCCCTCGATCTGGCCGC
TGCTTGGCTCTGTCGGGGCA

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MALRGPAKTVAQTVSVVIFMGALAWASVPLYDWFCRVTGFGGVTGVSDVAPEDILDQTITIRFDGSLNNHMPWEFKPVVR
EMDVRIGESGLAFYEAYNPTDRPVAGSASYNVTPYQAGGFFNKIQCFCFEEQVLQPGERVQMPVTFYVDPEIVDDRDGKH
VHTITLSYTFYEIDLPEEYADAQDIEENSDTSLN

Sequences:

>Translated_194_residues
MALRGPAKTVAQTVSVVIFMGALAWASVPLYDWFCRVTGFGGVTGVSDVAPEDILDQTITIRFDGSLNNHMPWEFKPVVR
EMDVRIGESGLAFYEAYNPTDRPVAGSASYNVTPYQAGGFFNKIQCFCFEEQVLQPGERVQMPVTFYVDPEIVDDRDGKH
VHTITLSYTFYEIDLPEEYADAQDIEENSDTSLN
>Mature_193_residues
ALRGPAKTVAQTVSVVIFMGALAWASVPLYDWFCRVTGFGGVTGVSDVAPEDILDQTITIRFDGSLNNHMPWEFKPVVRE
MDVRIGESGLAFYEAYNPTDRPVAGSASYNVTPYQAGGFFNKIQCFCFEEQVLQPGERVQMPVTFYVDPEIVDDRDGKHV
HTITLSYTFYEIDLPEEYADAQDIEENSDTSLN

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family

Homologues:

Organism=Homo sapiens, GI4758034, Length=169, Percent_Identity=46.1538461538462, Blast_Score=154, Evalue=5e-38,
Organism=Homo sapiens, GI242247057, Length=129, Percent_Identity=38.7596899224806, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI242247061, Length=122, Percent_Identity=40.1639344262295, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71990692, Length=175, Percent_Identity=45.1428571428571, Blast_Score=163, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6325125, Length=162, Percent_Identity=41.9753086419753, Blast_Score=137, Evalue=7e-34,
Organism=Drosophila melanogaster, GI24581944, Length=175, Percent_Identity=48, Blast_Score=164, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COXZ_ROSDO (Q167V9)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_682420.1
- ProteinModelPortal:   Q167V9
- SMR:   Q167V9
- STRING:   Q167V9
- GeneID:   4196603
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_2138
- NMPDR:   fig|375451.6.peg.1994
- eggNOG:   COG3175
- HOGENOM:   HBG525908
- OMA:   PANTQVD
- PhylomeDB:   Q167V9
- ProtClustDB:   PRK05089
- BioCyc:   RDEN375451:RD1_2138-MONOMER
- HAMAP:   MF_00155
- InterPro:   IPR007533
- Gene3D:   G3DSA:2.60.370.10
- PANTHER:   PTHR21320
- PIRSF:   PIRSF005413

Pfam domain/function: PF04442 CtaG_Cox11; SSF110111 CtaG_Cox11

EC number: NA

Molecular weight: Translated: 21698; Mature: 21567

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1cab5968)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRGPAKTVAQTVSVVIFMGALAWASVPLYDWFCRVTGFGGVTGVSDVAPEDILDQTIT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEE
IRFDGSLNNHMPWEFKPVVREMDVRIGESGLAFYEAYNPTDRPVAGSASYNVTPYQAGGF
EEECCCCCCCCCCCHHHHHHHHHCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
FNKIQCFCFEEQVLQPGERVQMPVTFYVDPEIVDDRDGKHVHTITLSYTFYEIDLPEEYA
CCEEEEEEEHHHHHCCCCCEECCEEEEECCEEECCCCCCEEEEEEEEEEEEEEECCHHHC
DAQDIEENSDTSLN
CHHHCCCCCCCCCH
>Mature Secondary Structure 
ALRGPAKTVAQTVSVVIFMGALAWASVPLYDWFCRVTGFGGVTGVSDVAPEDILDQTIT
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEE
IRFDGSLNNHMPWEFKPVVREMDVRIGESGLAFYEAYNPTDRPVAGSASYNVTPYQAGGF
EEECCCCCCCCCCCHHHHHHHHHCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
FNKIQCFCFEEQVLQPGERVQMPVTFYVDPEIVDDRDGKHVHTITLSYTFYEIDLPEEYA
CCEEEEEEEHHHHHCCCCCEECCEEEEECCEEECCCCCCEEEEEEEEEEEEEEECCHHHC
DAQDIEENSDTSLN
CHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA