Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is glmM

Identifier: 110679239

GI number: 110679239

Start: 1864737

End: 1866086

Strand: Direct

Name: glmM

Synonym: RD1_1952

Alternate gene names: 110679239

Gene position: 1864737-1866086 (Clockwise)

Preceding gene: 110679238

Following gene: 110679242

Centisome position: 45.12

GC content: 60.0

Gene sequence:

>1350_bases
ATGGATAAGCTTTTTGGAACGGATGGGGTGCGCGGCAAGGCCAATGAGCACCCGATGACAGCCGAGATGGCACTGCGTAT
CGGTGCTGCGGTAGGTAAATACTTCAGGCGCGATGGATCGGCAGCGCATCGCGTTGTGATCGGCAAGGATACGCGATTAT
CAGGCTATATGTTCGAAAACGCGCTGACGGCAGGGCTGACCTCAACGGGCATGAATGTGCTGTTGCTGGGTCCGGTGCCG
ACGCCTGCGGTCGGTCTGCTGACACGGTCGATGCGCGCGGACCTTGGGGTGATGATCTCGGCCAGCCATAACCCGGCCTG
TGACAATGGCATCAAGTTCTTTGGCCCTGACGGATTCAAACTGTCGGATCAGGCCGAAGAGGAGATCGAAGCGCTGATCG
CGTCCGGCGTCGATGCCGTGGAAGCGAATGACATCGGGCGGGCCAAACGCATTGATGATGGGCGTTTTCGCTACATCGAA
CGGCTCAAGACCTCCTTTCCTCGCCAGCGGCGGCTTGACGGGCTGAAAGTTGTGATTGATTGCGCAAATGGCGCGGCACA
CCGCGTCGCACCAGAGGCGCTATGGGAACTGGGTGCGACGGTCATTCCTGTTGGCGTGTCTCCGAACGGCAAGAACATCA
ACGAGGGCTGCGGGTCAACGCATCCGCAATTCGCGGCAGATACGGTCGTCGCCCATGGTGCTGACGTGGGCATCTGCCTT
GACGGCGATGCGGACCGCGTGATCCTGATTGATGAGACCGGCAAGGTTGGCGATGGTGACCAGTTCATGGCACTGATGGC
GCAACGCTGGGCGGAACGCGGCAAACTGGCGAATAATGCGCTGGTCGCGACGGTAATGTCCAACCTTGGTTTGGAGCATT
TTCTGAGCGATCTGGGTCTGAAACTGGAGCGCACGGCGGTTGGCGACCGATACGTGGTCGAACGGATGCGTGCCGGTGGC
TTCAACCTCGGGGGGGAGCAATCAGGTCACATTGTGATGACCGATTATGCAACCACGGGGGATGGCCTCATGGCGGGGTT
GCAGTTTCTCGCGGCGATGACGCAGTCCGAACAGCCTGCGAGTGTCTTGCTCAACCGGTTTGAACCGGTGCCGCAACTGC
TCAGGAACGTGCGATTTGCAGCAGGTCAAACCCCGCTTGAGGACGCCCGCGTGAAAGCCGCGATTGCGGCGGCGGAGGCT
GACCTGTCCGGCAAGGGGCGTTTGCTGATCCGTAAATCTGGCACCGAACCACTGGTGCGCGTGATGGCAGAACATGAGGA
TCAAACGGTGATGGAGCAGGCGGTCGACAGTGTTGTCGAAGCGGTCGCGGATGCTGTCGGCGGAACGTAA

Upstream 100 bases:

>100_bases
GCGGCTTTGAAACATGGGACACAAATTGTGCGCGTCCATGACGTGCCACAGACCCTGCAGGCCATTGCGCTTTGGCGCGC
GGTCGTGGCAGGACAGGGGC

Downstream 100 bases:

>100_bases
AGCGTCGGGCGACTTGCCAGACCATCTCATATCATCCAAGGGCCGAAGTCTCTGATTTCAGCCAGCCGGGGGGTGATTCA
GGCTTTGCGCATGGCACTTT

Product: phosphoglucosamine mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MDKLFGTDGVRGKANEHPMTAEMALRIGAAVGKYFRRDGSAAHRVVIGKDTRLSGYMFENALTAGLTSTGMNVLLLGPVP
TPAVGLLTRSMRADLGVMISASHNPACDNGIKFFGPDGFKLSDQAEEEIEALIASGVDAVEANDIGRAKRIDDGRFRYIE
RLKTSFPRQRRLDGLKVVIDCANGAAHRVAPEALWELGATVIPVGVSPNGKNINEGCGSTHPQFAADTVVAHGADVGICL
DGDADRVILIDETGKVGDGDQFMALMAQRWAERGKLANNALVATVMSNLGLEHFLSDLGLKLERTAVGDRYVVERMRAGG
FNLGGEQSGHIVMTDYATTGDGLMAGLQFLAAMTQSEQPASVLLNRFEPVPQLLRNVRFAAGQTPLEDARVKAAIAAAEA
DLSGKGRLLIRKSGTEPLVRVMAEHEDQTVMEQAVDSVVEAVADAVGGT

Sequences:

>Translated_449_residues
MDKLFGTDGVRGKANEHPMTAEMALRIGAAVGKYFRRDGSAAHRVVIGKDTRLSGYMFENALTAGLTSTGMNVLLLGPVP
TPAVGLLTRSMRADLGVMISASHNPACDNGIKFFGPDGFKLSDQAEEEIEALIASGVDAVEANDIGRAKRIDDGRFRYIE
RLKTSFPRQRRLDGLKVVIDCANGAAHRVAPEALWELGATVIPVGVSPNGKNINEGCGSTHPQFAADTVVAHGADVGICL
DGDADRVILIDETGKVGDGDQFMALMAQRWAERGKLANNALVATVMSNLGLEHFLSDLGLKLERTAVGDRYVVERMRAGG
FNLGGEQSGHIVMTDYATTGDGLMAGLQFLAAMTQSEQPASVLLNRFEPVPQLLRNVRFAAGQTPLEDARVKAAIAAAEA
DLSGKGRLLIRKSGTEPLVRVMAEHEDQTVMEQAVDSVVEAVADAVGGT
>Mature_449_residues
MDKLFGTDGVRGKANEHPMTAEMALRIGAAVGKYFRRDGSAAHRVVIGKDTRLSGYMFENALTAGLTSTGMNVLLLGPVP
TPAVGLLTRSMRADLGVMISASHNPACDNGIKFFGPDGFKLSDQAEEEIEALIASGVDAVEANDIGRAKRIDDGRFRYIE
RLKTSFPRQRRLDGLKVVIDCANGAAHRVAPEALWELGATVIPVGVSPNGKNINEGCGSTHPQFAADTVVAHGADVGICL
DGDADRVILIDETGKVGDGDQFMALMAQRWAERGKLANNALVATVMSNLGLEHFLSDLGLKLERTAVGDRYVVERMRAGG
FNLGGEQSGHIVMTDYATTGDGLMAGLQFLAAMTQSEQPASVLLNRFEPVPQLLRNVRFAAGQTPLEDARVKAAIAAAEA
DLSGKGRLLIRKSGTEPLVRVMAEHEDQTVMEQAVDSVVEAVADAVGGT

Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate

COG id: COG1109

COG function: function code G; Phosphomannomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphohexose mutase family

Homologues:

Organism=Escherichia coli, GI1789566, Length=445, Percent_Identity=49.438202247191, Blast_Score=401, Evalue=1e-113,
Organism=Escherichia coli, GI1788361, Length=468, Percent_Identity=28.4188034188034, Blast_Score=121, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLMM_ROSDO (Q168N3)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_682246.1
- ProteinModelPortal:   Q168N3
- SMR:   Q168N3
- STRING:   Q168N3
- GeneID:   4196774
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_1952
- NMPDR:   fig|375451.6.peg.1824
- eggNOG:   COG1109
- HOGENOM:   HBG644964
- OMA:   EEAGINS
- PhylomeDB:   Q168N3
- ProtClustDB:   PRK14315
- BioCyc:   RDEN375451:RD1_1952-MONOMER
- HAMAP:   MF_01554_B
- InterPro:   IPR005844
- InterPro:   IPR016055
- InterPro:   IPR005845
- InterPro:   IPR005846
- InterPro:   IPR005843
- InterPro:   IPR016066
- InterPro:   IPR005841
- InterPro:   IPR006352
- Gene3D:   G3DSA:3.40.120.10
- PRINTS:   PR00509
- TIGRFAMs:   TIGR01455

Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III

EC number: =5.4.2.10

Molecular weight: Translated: 47692; Mature: 47692

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00710 PGM_PMM

Important sites: ACT_SITE 102-102

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLFGTDGVRGKANEHPMTAEMALRIGAAVGKYFRRDGSAAHRVVIGKDTRLSGYMFEN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH
ALTAGLTSTGMNVLLLGPVPTPAVGLLTRSMRADLGVMISASHNPACDNGIKFFGPDGFK
HHHHCHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCC
LSDQAEEEIEALIASGVDAVEANDIGRAKRIDDGRFRYIERLKTSFPRQRRLDGLKVVID
CCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCHHHCCCCEEEEEE
CANGAAHRVAPEALWELGATVIPVGVSPNGKNINEGCGSTHPQFAADTVVAHGADVGICL
CCCCCCHHCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEE
DGDADRVILIDETGKVGDGDQFMALMAQRWAERGKLANNALVATVMSNLGLEHFLSDLGL
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCC
KLERTAVGDRYVVERMRAGGFNLGGEQSGHIVMTDYATTGDGLMAGLQFLAAMTQSEQPA
EEEEHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHH
SVLLNRFEPVPQLLRNVRFAAGQTPLEDARVKAAIAAAEADLSGKGRLLIRKSGTEPLVR
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
VMAEHEDQTVMEQAVDSVVEAVADAVGGT
HHHHCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKLFGTDGVRGKANEHPMTAEMALRIGAAVGKYFRRDGSAAHRVVIGKDTRLSGYMFEN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH
ALTAGLTSTGMNVLLLGPVPTPAVGLLTRSMRADLGVMISASHNPACDNGIKFFGPDGFK
HHHHCHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCC
LSDQAEEEIEALIASGVDAVEANDIGRAKRIDDGRFRYIERLKTSFPRQRRLDGLKVVID
CCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCHHHCCCCEEEEEE
CANGAAHRVAPEALWELGATVIPVGVSPNGKNINEGCGSTHPQFAADTVVAHGADVGICL
CCCCCCHHCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEE
DGDADRVILIDETGKVGDGDQFMALMAQRWAERGKLANNALVATVMSNLGLEHFLSDLGL
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCC
KLERTAVGDRYVVERMRAGGFNLGGEQSGHIVMTDYATTGDGLMAGLQFLAAMTQSEQPA
EEEEHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHH
SVLLNRFEPVPQLLRNVRFAAGQTPLEDARVKAAIAAAEADLSGKGRLLIRKSGTEPLVR
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
VMAEHEDQTVMEQAVDSVVEAVADAVGGT
HHHHCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA