Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is folB

Identifier: 110679237

GI number: 110679237

Start: 1862805

End: 1863728

Strand: Direct

Name: folB

Synonym: RD1_1950

Alternate gene names: NA

Gene position: 1862805-1863728 (Clockwise)

Preceding gene: 110679236

Following gene: 110679238

Centisome position: 45.07

GC content: 60.39

Gene sequence:

>924_bases
ATGAGTTCCGAAATACGGCTTGCCTTTGCGCATCCTTCCGAAAGGTCCGAGGCGACGGCTGACACGACACCATTGGATCG
CATCTCCTTGCGCGATCATATCGTCGAGGTTGAGATCGGCGCGTTTCAGGCCGAGCGTGGGGTCACCCAGCGGATTTGCT
TCAACGTCGTGGTCGAGGTGCAGCCGCTGACGGGGCCGATTGACGACGATGTCGACCGCATTCTGAGCTATGACCGCGTC
ACCGAAGCCATCGCCGGCGCGCTTGCCGATGAACGCCTCAACCTGCTTGAGACACTGGCGGAGCGCGTTGCGGAACGCAT
TTTGCTGGAACCGCAGGCCACACGGGCATTTGTTCGCATCGAAAAGCTGGACCGGGGTCCGGGCGCGCTGGGTGTGGAGA
TTGTGCGCTCTGCCAAGATGCTGACCGCCGCGCCGGAAGAGGAAATTACAACCGTCCGACCCGAATTGCTCTATCTCAGC
AACGAGGCCATCGCTTCACCACATCTGAAAAAATGGATTGATCAGCTTGAAAAATCCGGCCGCCCGCTGGTGTTTTGTGT
CGGCGCATCCGACACGCGCGCCCCGCAGATCAATCACCGCATGACGCAGCGCCGGATCGACCTGTTGGCCATCGAACAAA
ACGCTTGGGTGCTGGCTTCAAAGGACGACCGCTGCGTGGTGGTTTCCACGCGCACGGAACTTGATTGGGCCATGAAAAAC
GGCCAATCCTCGGTATGGGCACCCTCAAAGATCGTCCTTGACGCTGTGGATGGCCCATCCGCGCAACCGCGCGATGCCGT
GGCCTTGGCTGCTTGGTTTGCGGCCACCCTCGGGGCACGGGAAATGGTCGTGATCGGGGCGGAATTGCCCAGTGAGGCTT
CTGTGCCTTTGCGCCATGTCTCCGCCGACGCTGAAGTCTGGTAA

Upstream 100 bases:

>100_bases
CAACTGACGTATTCCAGACCCAGAGTGGCGGTCTGCGCTTTGCGCCCCGGCGCGCTTTCGTTAAGATGCGCGTAATGTTC
AGGGAAAAGAGGCGCTTTGA

Downstream 100 bases:

>100_bases
ACATGCAGCCCTATTTTCGACCGCTCTTGCAATCGGGGCCTGTGCGTCCGCGCAGTGCCGTCACGCTGGCCGGGGGCTGG
ACGTGGTTTACAGATATCGA

Product: dihydroneopterin aldolase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSSEIRLAFAHPSERSEATADTTPLDRISLRDHIVEVEIGAFQAERGVTQRICFNVVVEVQPLTGPIDDDVDRILSYDRV
TEAIAGALADERLNLLETLAERVAERILLEPQATRAFVRIEKLDRGPGALGVEIVRSAKMLTAAPEEEITTVRPELLYLS
NEAIASPHLKKWIDQLEKSGRPLVFCVGASDTRAPQINHRMTQRRIDLLAIEQNAWVLASKDDRCVVVSTRTELDWAMKN
GQSSVWAPSKIVLDAVDGPSAQPRDAVALAAWFAATLGAREMVVIGAELPSEASVPLRHVSADAEVW

Sequences:

>Translated_307_residues
MSSEIRLAFAHPSERSEATADTTPLDRISLRDHIVEVEIGAFQAERGVTQRICFNVVVEVQPLTGPIDDDVDRILSYDRV
TEAIAGALADERLNLLETLAERVAERILLEPQATRAFVRIEKLDRGPGALGVEIVRSAKMLTAAPEEEITTVRPELLYLS
NEAIASPHLKKWIDQLEKSGRPLVFCVGASDTRAPQINHRMTQRRIDLLAIEQNAWVLASKDDRCVVVSTRTELDWAMKN
GQSSVWAPSKIVLDAVDGPSAQPRDAVALAAWFAATLGAREMVVIGAELPSEASVPLRHVSADAEVW
>Mature_306_residues
SSEIRLAFAHPSERSEATADTTPLDRISLRDHIVEVEIGAFQAERGVTQRICFNVVVEVQPLTGPIDDDVDRILSYDRVT
EAIAGALADERLNLLETLAERVAERILLEPQATRAFVRIEKLDRGPGALGVEIVRSAKMLTAAPEEEITTVRPELLYLSN
EAIASPHLKKWIDQLEKSGRPLVFCVGASDTRAPQINHRMTQRRIDLLAIEQNAWVLASKDDRCVVVSTRTELDWAMKNG
QSSVWAPSKIVLDAVDGPSAQPRDAVALAAWFAATLGAREMVVIGAELPSEASVPLRHVSADAEVW

Specific function: Unknown

COG id: COG1539

COG function: function code H; Dihydroneopterin aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33754; Mature: 33623

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEIRLAFAHPSERSEATADTTPLDRISLRDHIVEVEIGAFQAERGVTQRICFNVVVEV
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHEEEEEEECCEEHHCCHHHHHHEEEEEEE
QPLTGPIDDDVDRILSYDRVTEAIAGALADERLNLLETLAERVAERILLEPQATRAFVRI
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEE
EKLDRGPGALGVEIVRSAKMLTAAPEEEITTVRPELLYLSNEAIASPHLKKWIDQLEKSG
EHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCHHCCHHHHHHHHHHHHCC
RPLVFCVGASDTRAPQINHRMTQRRIDLLAIEQNAWVLASKDDRCVVVSTRTELDWAMKN
CCEEEEECCCCCCCCCHHHHHHHHHEEEEEEECCCEEEECCCCCEEEEEECCCHHHHHHC
GQSSVWAPSKIVLDAVDGPSAQPRDAVALAAWFAATLGAREMVVIGAELPSEASVPLRHV
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEE
SADAEVW
CCCCCCC
>Mature Secondary Structure 
SSEIRLAFAHPSERSEATADTTPLDRISLRDHIVEVEIGAFQAERGVTQRICFNVVVEV
CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHEEEEEEECCEEHHCCHHHHHHEEEEEEE
QPLTGPIDDDVDRILSYDRVTEAIAGALADERLNLLETLAERVAERILLEPQATRAFVRI
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEE
EKLDRGPGALGVEIVRSAKMLTAAPEEEITTVRPELLYLSNEAIASPHLKKWIDQLEKSG
EHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCHHCCHHHHHHHHHHHHCC
RPLVFCVGASDTRAPQINHRMTQRRIDLLAIEQNAWVLASKDDRCVVVSTRTELDWAMKN
CCEEEEECCCCCCCCCHHHHHHHHHEEEEEEECCCEEEECCCCCEEEEEECCCHHHHHHC
GQSSVWAPSKIVLDAVDGPSAQPRDAVALAAWFAATLGAREMVVIGAELPSEASVPLRHV
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEE
SADAEVW
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA