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The map label for this gene is 110679179

Identifier: 110679179

GI number: 110679179

Start: 1805553

End: 1805999

Strand: Direct

Name: 110679179

Synonym: RD1_1889

Alternate gene names: NA

Gene position: 1805553-1805999 (Clockwise)

Preceding gene: 110679178

Following gene: 110679180

Centisome position: 43.69

GC content: 50.78

Gene sequence:

>447_bases
ATGAGCAAGACACCTGATCTCTCCGCAATGTTCAAAGACGTTTTGGGCGCTTTTCCGGTAGACACCAAAGCATTTGACGA
AGCTTTCAAAACATCGGCGACGCTGAATGAAAAGCTCTCCACCGTTGCGCTGACCGCAGCAGAAAAGTCCACAGACATCT
CCAACAAATGGGCGCAAGACACGCTTGCGAAAATGTCGGACATGGCCAAAGCTAAGGCAGAGCCTGCTGACTACGCGAAA
GCGATGACAGATTTCGCTTCCGCCTATTCCGAAACAGCTGCAGAGCACATGGCTGCTTTCGCTGAAGTGGCGAAAAAAGC
GCAAATGGACACAGTTGAGTTAATGATGGCCGCTGGCAAAGACATGAGCGAAGACGCTCAGGCCGCAGTCAAGAAAGCAA
CCAACGAAGCGACTGCAGTTGTCAAGAAAGCTGCAAAAGCCAACTAA

Upstream 100 bases:

>100_bases
CAGTGCAGAAAAAAGCTTGCAATGCTGCGCTGCGGCATCTATATATTTCTCAGACGCAACAGACCGGGATCATCCCGGAA
GGCGACGAAAGGAATTAGAT

Downstream 100 bases:

>100_bases
GTCAGAAATCTGATTTGCGCTGGATCCTCCCTGTAAGGCGCAATGATGTCGGGCGAGCTTGTGAAAGCTCGCCCTTTCTT
TTTGCGCGCCCGTGTCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Granule-Associated Protein

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSKTPDLSAMFKDVLGAFPVDTKAFDEAFKTSATLNEKLSTVALTAAEKSTDISNKWAQDTLAKMSDMAKAKAEPADYAK
AMTDFASAYSETAAEHMAAFAEVAKKAQMDTVELMMAAGKDMSEDAQAAVKKATNEATAVVKKAAKAN

Sequences:

>Translated_148_residues
MSKTPDLSAMFKDVLGAFPVDTKAFDEAFKTSATLNEKLSTVALTAAEKSTDISNKWAQDTLAKMSDMAKAKAEPADYAK
AMTDFASAYSETAAEHMAAFAEVAKKAQMDTVELMMAAGKDMSEDAQAAVKKATNEATAVVKKAAKAN
>Mature_147_residues
SKTPDLSAMFKDVLGAFPVDTKAFDEAFKTSATLNEKLSTVALTAAEKSTDISNKWAQDTLAKMSDMAKAKAEPADYAKA
MTDFASAYSETAAEHMAAFAEVAKKAQMDTVELMMAAGKDMSEDAQAAVKKATNEATAVVKKAAKAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15659; Mature: 15528

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTPDLSAMFKDVLGAFPVDTKAFDEAFKTSATLNEKLSTVALTAAEKSTDISNKWAQD
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TLAKMSDMAKAKAEPADYAKAMTDFASAYSETAAEHMAAFAEVAKKAQMDTVELMMAAGK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DMSEDAQAAVKKATNEATAVVKKAAKAN
CCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKTPDLSAMFKDVLGAFPVDTKAFDEAFKTSATLNEKLSTVALTAAEKSTDISNKWAQD
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TLAKMSDMAKAKAEPADYAKAMTDFASAYSETAAEHMAAFAEVAKKAQMDTVELMMAAGK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DMSEDAQAAVKKATNEATAVVKKAAKAN
CCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA