| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679150
Identifier: 110679150
GI number: 110679150
Start: 1781132
End: 1781362
Strand: Reverse
Name: 110679150
Synonym: RD1_1860
Alternate gene names: NA
Gene position: 1781362-1781132 (Counterclockwise)
Preceding gene: 110679155
Following gene: 110679145
Centisome position: 43.1
GC content: 64.5
Gene sequence:
>231_bases GTGCCCGCAGCCACAACCGGGTCGAGCGCGGATGTGGGTTCATCCATGACAAGCAGGTCAGGCGTGCCGATCAGGGCCAT GGCGATGACGAAACGCTGCTGCATCCCCCGGCTCCATCCCCAGGGGCGTTTGCGCAGATCACCGCCTTCTATGCGCAGGG CTTCAAACAGCATGGACCGGCGGACAGGATCAGGCGGCAGGCCCAATGCCTGTTCCGCTTCACGCCAGTGA
Upstream 100 bases:
>100_bases CATCAACCGCGTCACACGCCTTGCGGCAAGTCCGAGGTCATGGGTGATCAGCAGCAAGGCCGTTGTCCGATCCGACAGGT AGCGATCCAGGAGGTCCATC
Downstream 100 bases:
>100_bases AACGCCATACTGCGCAGCGGGTCGAGCGCTTCCTCCGGGCTTTGTGGGACATGTGTCACGCTTTGACCGCCTGCGCGCAG GGCATCAATCAGCACGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MPAATTGSSADVGSSMTSRSGVPIRAMAMTKRCCIPRLHPQGRLRRSPPSMRRASNSMDRRTGSGGRPNACSASRQ
Sequences:
>Translated_76_residues MPAATTGSSADVGSSMTSRSGVPIRAMAMTKRCCIPRLHPQGRLRRSPPSMRRASNSMDRRTGSGGRPNACSASRQ >Mature_75_residues PAATTGSSADVGSSMTSRSGVPIRAMAMTKRCCIPRLHPQGRLRRSPPSMRRASNSMDRRTGSGGRPNACSASRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8061; Mature: 7930
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 11.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAATTGSSADVGSSMTSRSGVPIRAMAMTKRCCIPRLHPQGRLRRSPPSMRRASNSMDR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH RTGSGGRPNACSASRQ CCCCCCCCCCCCCCCC >Mature Secondary Structure PAATTGSSADVGSSMTSRSGVPIRAMAMTKRCCIPRLHPQGRLRRSPPSMRRASNSMDR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH RTGSGGRPNACSASRQ CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA