Click here to switch to the map view.

The map label for this gene is 110679155

Identifier: 110679155

GI number: 110679155

Start: 1785070

End: 1786575

Strand: Reverse

Name: 110679155

Synonym: RD1_1865

Alternate gene names: NA

Gene position: 1786575-1785070 (Counterclockwise)

Preceding gene: 110679156

Following gene: 110679150

Centisome position: 43.23

GC content: 59.1

Gene sequence:

>1506_bases
ATGATGGAAACACTGGGCTATTTCGCGACCTCGTGGACAGATCCCTATCTGCTGCTGATCACCGCACTTGGCACATTTGC
CGGCATCTATATCGGTGCCATTCCGGGGTTGTCGGTCACGATGGCCGCGTCGATCCTGATTTCCTTCACTTTCAAATGGG
ACGTCAACGAGGCCCTTGCCCTGATCGTGGGCGTCTATGTGGGCGGTGTCTATGGCGGGGCGCGCACCGCCATCCTGCTC
AATATTCCCGGCGCACCCAGTGCAATCGCCACGGCACTCGATGGCTATCCGCTGGCCAAGAAAGGGCTGGCCGGGGAGGC
GATCGGTCTTTCGACGGTCATGTCGGTCATGGGCGGCCTTGTCGGTGTTCTTGCACTGGCCCTTGCGGCGCCTTTGATCG
CTGATTTCGCCATCAAATTCACCTCGCGCGATTACATGCTTCTGGGCATCATCGGCATTCTGCTCGTCGGGACGCTGTCC
GGCGAGAGCTTTGCCAAGGGGGCCTTTGCCGGGGCACTTGGCGTGATGATCGGCATGATCGGTCTTGATCCGATGACGGC
CGAGACGCGCTTTACTTATGGCTCGATCAATCTGATGGGGGGTGTTCCCTTCGTTGTGGCGATGATCGGGTTCTTCGGCG
TGGCCCAGGCGCTGGTGCAGCTGGAACACATCGACACAGCACCAATCAAGCAAAAGGTATCACGGATCATTCCGGCCTGG
TCGGATGTCCGCCGTTATCTGGGCCTAGGCCTCAAATCCTCTGGTCTTGGCACAATGATCGGCGCGTTGCCCGGCACGGG
CGGTGATATCGCCGCACTGCTGGCCTACGATCAGGCCAAACGCAGCACGAAAAACCCCGATGTGCCCTTTGGCGAGGGGG
CCAAGGAGGGGCTGATCGCGCCTGAAACGGCCAATAACGCCGCCGTGGGCGGGGCCTTTGTGCCGATGCTGACACTGGGC
ATTCCCGGCGATGCAGTGACCGCCATCATCATCGGCGCGTTATATATTCATGGGCTAAAGCCCGGCCCGCTGCTGCTGAG
CGATACGCCGCATTTGTTCTGGTTCATCGTCGGCAACCTGACGCTGGCCAACCTGTTCCTGCTGGTTTTCGGGCTGACCG
GCATCCGAATCTTCACAAAGGTCGTCGAATGCCCGCGCGCGATCCTGATACCGCTGATCATCATATTGTCTGCGGTCGGT
GCCTATGCGATCCAGAACAACCCGGTACATATCACATGGGCGCTGGCCTTTGGTGTCATCGGCTATTTTCTGATCCGCTA
CGGATTTCAGGTCGGGCCCATCATCCTAGGGGTCATTCTGGGACCGATGATCGACGCCAATTACCGCCGCGCGATGATTG
GCGCGCAGGAAGATATCGGGACGTTCCTTTACGACCTGCTGAGCAATCCCATCTCTCTCGTGTTGACCTGCGCGCTGGTC
TTGATGTTCCTCAACCAGCTGCCGTTTGTGAAAAACAGAAAGCGCCGCGCAGACCAGCGGGTCTGA

Upstream 100 bases:

>100_bases
CGGTCTGGGCGCTGGTGCTTTCACTGCTTTCGGTCGGGGCCATCTACGTTCTGTTTCGCGTTGTCTTTCAGGTCGTTCTG
CCCCTTGGGAGCCTGTGGCG

Downstream 100 bases:

>100_bases
TGAAGCACCTGAAACGTCAAGTATCGCGTAGCGTGTTGAAATGCTTGAATTCAGGCAGCATTGCGTGATTGAGGTTTTTC
GCATGACGCTACAGCTTTGT

Product: integral membrane protein, putative

Products: NA

Alternate protein names: ORFZ2 [H]

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MMETLGYFATSWTDPYLLLITALGTFAGIYIGAIPGLSVTMAASILISFTFKWDVNEALALIVGVYVGGVYGGARTAILL
NIPGAPSAIATALDGYPLAKKGLAGEAIGLSTVMSVMGGLVGVLALALAAPLIADFAIKFTSRDYMLLGIIGILLVGTLS
GESFAKGAFAGALGVMIGMIGLDPMTAETRFTYGSINLMGGVPFVVAMIGFFGVAQALVQLEHIDTAPIKQKVSRIIPAW
SDVRRYLGLGLKSSGLGTMIGALPGTGGDIAALLAYDQAKRSTKNPDVPFGEGAKEGLIAPETANNAAVGGAFVPMLTLG
IPGDAVTAIIIGALYIHGLKPGPLLLSDTPHLFWFIVGNLTLANLFLLVFGLTGIRIFTKVVECPRAILIPLIIILSAVG
AYAIQNNPVHITWALAFGVIGYFLIRYGFQVGPIILGVILGPMIDANYRRAMIGAQEDIGTFLYDLLSNPISLVLTCALV
LMFLNQLPFVKNRKRRADQRV

Sequences:

>Translated_501_residues
MMETLGYFATSWTDPYLLLITALGTFAGIYIGAIPGLSVTMAASILISFTFKWDVNEALALIVGVYVGGVYGGARTAILL
NIPGAPSAIATALDGYPLAKKGLAGEAIGLSTVMSVMGGLVGVLALALAAPLIADFAIKFTSRDYMLLGIIGILLVGTLS
GESFAKGAFAGALGVMIGMIGLDPMTAETRFTYGSINLMGGVPFVVAMIGFFGVAQALVQLEHIDTAPIKQKVSRIIPAW
SDVRRYLGLGLKSSGLGTMIGALPGTGGDIAALLAYDQAKRSTKNPDVPFGEGAKEGLIAPETANNAAVGGAFVPMLTLG
IPGDAVTAIIIGALYIHGLKPGPLLLSDTPHLFWFIVGNLTLANLFLLVFGLTGIRIFTKVVECPRAILIPLIIILSAVG
AYAIQNNPVHITWALAFGVIGYFLIRYGFQVGPIILGVILGPMIDANYRRAMIGAQEDIGTFLYDLLSNPISLVLTCALV
LMFLNQLPFVKNRKRRADQRV
>Mature_501_residues
MMETLGYFATSWTDPYLLLITALGTFAGIYIGAIPGLSVTMAASILISFTFKWDVNEALALIVGVYVGGVYGGARTAILL
NIPGAPSAIATALDGYPLAKKGLAGEAIGLSTVMSVMGGLVGVLALALAAPLIADFAIKFTSRDYMLLGIIGILLVGTLS
GESFAKGAFAGALGVMIGMIGLDPMTAETRFTYGSINLMGGVPFVVAMIGFFGVAQALVQLEHIDTAPIKQKVSRIIPAW
SDVRRYLGLGLKSSGLGTMIGALPGTGGDIAALLAYDQAKRSTKNPDVPFGEGAKEGLIAPETANNAAVGGAFVPMLTLG
IPGDAVTAIIIGALYIHGLKPGPLLLSDTPHLFWFIVGNLTLANLFLLVFGLTGIRIFTKVVECPRAILIPLIIILSAVG
AYAIQNNPVHITWALAFGVIGYFLIRYGFQVGPIILGVILGPMIDANYRRAMIGAQEDIGTFLYDLLSNPISLVLTCALV
LMFLNQLPFVKNRKRRADQRV

Specific function: Unknown

COG id: COG3333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 52607; Mature: 52607

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMETLGYFATSWTDPYLLLITALGTFAGIYIGAIPGLSVTMAASILISFTFKWDVNEALA
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECHHHHHH
LIVGVYVGGVYGGARTAILLNIPGAPSAIATALDGYPLAKKGLAGEAIGLSTVMSVMGGL
HHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHH
VGVLALALAAPLIADFAIKFTSRDYMLLGIIGILLVGTLSGESFAKGAFAGALGVMIGMI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GLDPMTAETRFTYGSINLMGGVPFVVAMIGFFGVAQALVQLEHIDTAPIKQKVSRIIPAW
CCCCCCCCCEEEEECEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH
SDVRRYLGLGLKSSGLGTMIGALPGTGGDIAALLAYDQAKRSTKNPDVPFGEGAKEGLIA
HHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PETANNAAVGGAFVPMLTLGIPGDAVTAIIIGALYIHGLKPGPLLLSDTPHLFWFIVGNL
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHH
TLANLFLLVFGLTGIRIFTKVVECPRAILIPLIIILSAVGAYAIQNNPVHITWALAFGVI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
GYFLIRYGFQVGPIILGVILGPMIDANYRRAMIGAQEDIGTFLYDLLSNPISLVLTCALV
HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH
LMFLNQLPFVKNRKRRADQRV
HHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MMETLGYFATSWTDPYLLLITALGTFAGIYIGAIPGLSVTMAASILISFTFKWDVNEALA
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECHHHHHH
LIVGVYVGGVYGGARTAILLNIPGAPSAIATALDGYPLAKKGLAGEAIGLSTVMSVMGGL
HHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHH
VGVLALALAAPLIADFAIKFTSRDYMLLGIIGILLVGTLSGESFAKGAFAGALGVMIGMI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GLDPMTAETRFTYGSINLMGGVPFVVAMIGFFGVAQALVQLEHIDTAPIKQKVSRIIPAW
CCCCCCCCCEEEEECEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH
SDVRRYLGLGLKSSGLGTMIGALPGTGGDIAALLAYDQAKRSTKNPDVPFGEGAKEGLIA
HHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PETANNAAVGGAFVPMLTLGIPGDAVTAIIIGALYIHGLKPGPLLLSDTPHLFWFIVGNL
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHH
TLANLFLLVFGLTGIRIFTKVVECPRAILIPLIIILSAVGAYAIQNNPVHITWALAFGVI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
GYFLIRYGFQVGPIILGVILGPMIDANYRRAMIGAQEDIGTFLYDLLSNPISLVLTCALV
HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH
LMFLNQLPFVKNRKRRADQRV
HHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]