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The map label for this gene is ywnA [H]

Identifier: 110679145

GI number: 110679145

Start: 1776726

End: 1777259

Strand: Reverse

Name: ywnA [H]

Synonym: RD1_1855

Alternate gene names: 110679145

Gene position: 1777259-1776726 (Counterclockwise)

Preceding gene: 110679150

Following gene: 110679140

Centisome position: 43.0

GC content: 54.31

Gene sequence:

>534_bases
GTGACATTCTGTGCTCCAAAGCTTAGATCGCATATTACGCAACTTACTCAGTTACTAGACTATTGCAACAGCAATTGTTA
CGTAATGTGGGACGTCAGAGGAAAAGCGCCTATGAAACGTAATTCACGGTTATCGCTTGCGCTGCACACGCTCGGGCATA
TGGCAGGTGATCCGGAAAGAGTGCAGACATCTGCCGATATTGCGGAACATGCCGGTACGAACCCTGTCGTTGTCAGGCGC
GTTTTGGGAAAGCTGCGCAAGGCGGGCCTTCTGACGTCAGAAAAGGGTCACGCGGGCGGGTGGCGGCTTGCGCGTGCACC
GGGCCAAATAACTCTGGCTGATGTGTACCTCGCACTTGATGAGAGCCTCGTTGCCACCGGTGAAGCCGAGGCAATTCCTG
CATGTTCCGTGGAGCATATCCTGCAGAGGAAAGTCGCATCCGTGCTAAAGGACGTGGAACAAAGCCTTGTAGAAAGGCTT
TCCGCCACCACGATCGCAGAGGTCCGTGAGTCCAACGACATGAACGCCGGTTGA

Upstream 100 bases:

>100_bases
GCAACGCGCCGACCTTCCCGATTGTTCAGAACACGGTTCAACAGCGTGGTTTTTCCAGCCCCCAAGAATCCGGAAAGAAC
CGTGACGGGAAGACGAGCCT

Downstream 100 bases:

>100_bases
ACCACGATGGCGGTTGCGACTACGCGCTCAAACGTCAAAGCCGCCGTTTTGCACGACACTTCGGAGTGACAGGGTTAAAT
CACTGGCAGCATCGACCTTG

Product: rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTFCAPKLRSHITQLTQLLDYCNSNCYVMWDVRGKAPMKRNSRLSLALHTLGHMAGDPERVQTSADIAEHAGTNPVVVRR
VLGKLRKAGLLTSEKGHAGGWRLARAPGQITLADVYLALDESLVATGEAEAIPACSVEHILQRKVASVLKDVEQSLVERL
SATTIAEVRESNDMNAG

Sequences:

>Translated_177_residues
MTFCAPKLRSHITQLTQLLDYCNSNCYVMWDVRGKAPMKRNSRLSLALHTLGHMAGDPERVQTSADIAEHAGTNPVVVRR
VLGKLRKAGLLTSEKGHAGGWRLARAPGQITLADVYLALDESLVATGEAEAIPACSVEHILQRKVASVLKDVEQSLVERL
SATTIAEVRESNDMNAG
>Mature_176_residues
TFCAPKLRSHITQLTQLLDYCNSNCYVMWDVRGKAPMKRNSRLSLALHTLGHMAGDPERVQTSADIAEHAGTNPVVVRRV
LGKLRKAGLLTSEKGHAGGWRLARAPGQITLADVYLALDESLVATGEAEAIPACSVEHILQRKVASVLKDVEQSLVERLS
ATTIAEVRESNDMNAG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 19228; Mature: 19097

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFCAPKLRSHITQLTQLLDYCNSNCYVMWDVRGKAPMKRNSRLSLALHTLGHMAGDPER
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHH
VQTSADIAEHAGTNPVVVRRVLGKLRKAGLLTSEKGHAGGWRLARAPGQITLADVYLALD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEHHHHHHHHH
ESLVATGEAEAIPACSVEHILQRKVASVLKDVEQSLVERLSATTIAEVRESNDMNAG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TFCAPKLRSHITQLTQLLDYCNSNCYVMWDVRGKAPMKRNSRLSLALHTLGHMAGDPER
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHH
VQTSADIAEHAGTNPVVVRRVLGKLRKAGLLTSEKGHAGGWRLARAPGQITLADVYLALD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEHHHHHHHHH
ESLVATGEAEAIPACSVEHILQRKVASVLKDVEQSLVERLSATTIAEVRESNDMNAG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]