Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is proX [C]

Identifier: 110679133

GI number: 110679133

Start: 1764222

End: 1765181

Strand: Direct

Name: proX [C]

Synonym: RD1_1839

Alternate gene names: 110679133

Gene position: 1764222-1765181 (Clockwise)

Preceding gene: 110679132

Following gene: 110679135

Centisome position: 42.69

GC content: 56.25

Gene sequence:

>960_bases
ATGACTTTGAAGATGAAACTGATGACTGCAGCGCTTGCCAGCGTGGTAAGCGTTCCCGCCTTCGCGGAAGAGGTGAAAAT
CGGGGTGCCGACATGGACCGGGGCGCAGGCGATTGCCTATGTCTTGGGCGAGGTGGTCACAACACGCATTGGCGGAACAG
TTGATTATGTTCCCGGCAACAACGCCACAATTTTCCAGGCCATGGACCAGGGCGAGGGCGACATTGACGTGCACCCTGAT
GTCTGGCTGCCAAACCAGGAGAGCTTTACCAAGCAATATGTGGATGAAGCCGGCACCGTGACGCTGTCAACGAACCCCTA
TCAGGGCAATCAGGGCTTCTGCGTGTCCAAGGATTTTGCAGCGGCCAACGACATCACCGACATTGCGGATCTGGGCCGCC
CGGATGTGGCGGCCCTGATGGACAGCGATGGCAACGGGCTGGGCGAAATGTGGATTGGCGCACCCGGCTGGGCGTCTGCA
AACGTCAATGAAGTAAAGGTTCGCGACTACGGCCTGCTCGACTTTATCGAGCCAATTCGCGCCGAAGAAGCGGTCAAGAC
CGCACGGATCAAGGACAGTATTGCAAAGGGCGAGGGCTATGCGTTCTATTGCTATGAGCCGCATGCGGTTTGGTACATGT
TTGACGTTGTCATGCTGACTGAGCCAGCTTTCGACCCGGAAAAATACATCATGGTGCAACCATCCGATGATGCGGACTGG
TATGAGAAATCGATGGTGGCGACCAAGGATGACCTCAAGCAGGTCCAGATCGCATGGTCCAATTCCCTGCCCGAGCGTGC
GCCAGCCATCGCGGAGTTCTTTGCGAATTTTCAGTTGACTGCCGATGATGTCAGCAGCCTTGCATTTGAGATCAGTGCGA
ATGGCCGTGAACCATCAGACGTCGCAGCAGAGTGGGTTGCCGCGAATTCTGACCGCGTTGATGCAATGCTGGGCCTGTAA

Upstream 100 bases:

>100_bases
ACAGGGGGCAGTGCCGCGCTCTTTGGCTACCCCGACACCTTCGGACTGCCCGGCTATGTAACATAAAAACGCAAGAAACA
GACCAACAAGGAGACTAGAG

Downstream 100 bases:

>100_bases
GAGGCGGAGTGAATCAAACATGATCGGCGCGCGTGATCGCGCCGATCATTCAAACAGCGGGTGGGGCGAGCATGCAAATC
AATGACTGCGTTATCGAAAT

Product: glycine betaine/L-proline ABC transporter, substrate binding protein, putative

Products: ADP; phosphate; L-proline [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTLKMKLMTAALASVVSVPAFAEEVKIGVPTWTGAQAIAYVLGEVVTTRIGGTVDYVPGNNATIFQAMDQGEGDIDVHPD
VWLPNQESFTKQYVDEAGTVTLSTNPYQGNQGFCVSKDFAAANDITDIADLGRPDVAALMDSDGNGLGEMWIGAPGWASA
NVNEVKVRDYGLLDFIEPIRAEEAVKTARIKDSIAKGEGYAFYCYEPHAVWYMFDVVMLTEPAFDPEKYIMVQPSDDADW
YEKSMVATKDDLKQVQIAWSNSLPERAPAIAEFFANFQLTADDVSSLAFEISANGREPSDVAAEWVAANSDRVDAMLGL

Sequences:

>Translated_319_residues
MTLKMKLMTAALASVVSVPAFAEEVKIGVPTWTGAQAIAYVLGEVVTTRIGGTVDYVPGNNATIFQAMDQGEGDIDVHPD
VWLPNQESFTKQYVDEAGTVTLSTNPYQGNQGFCVSKDFAAANDITDIADLGRPDVAALMDSDGNGLGEMWIGAPGWASA
NVNEVKVRDYGLLDFIEPIRAEEAVKTARIKDSIAKGEGYAFYCYEPHAVWYMFDVVMLTEPAFDPEKYIMVQPSDDADW
YEKSMVATKDDLKQVQIAWSNSLPERAPAIAEFFANFQLTADDVSSLAFEISANGREPSDVAAEWVAANSDRVDAMLGL
>Mature_318_residues
TLKMKLMTAALASVVSVPAFAEEVKIGVPTWTGAQAIAYVLGEVVTTRIGGTVDYVPGNNATIFQAMDQGEGDIDVHPDV
WLPNQESFTKQYVDEAGTVTLSTNPYQGNQGFCVSKDFAAANDITDIADLGRPDVAALMDSDGNGLGEMWIGAPGWASAN
VNEVKVRDYGLLDFIEPIRAEEAVKTARIKDSIAKGEGYAFYCYEPHAVWYMFDVVMLTEPAFDPEKYIMVQPSDDADWY
EKSMVATKDDLKQVQIAWSNSLPERAPAIAEFFANFQLTADDVSSLAFEISANGREPSDVAAEWVAANSDRVDAMLGL

Specific function: Member Of A Multicomponent Binding-Protein-Dependent Transport System (The Prou Transporter) Which Serves As The Glycine Betaine/L-Proline Transporter. [C]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34697; Mature: 34566

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKMKLMTAALASVVSVPAFAEEVKIGVPTWTGAQAIAYVLGEVVTTRIGGTVDYVPGN
CEEEHHHHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCC
NATIFQAMDQGEGDIDVHPDVWLPNQESFTKQYVDEAGTVTLSTNPYQGNQGFCVSKDFA
CCEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC
AANDITDIADLGRPDVAALMDSDGNGLGEMWIGAPGWASANVNEVKVRDYGLLDFIEPIR
CCCCCHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHH
AEEAVKTARIKDSIAKGEGYAFYCYEPHAVWYMFDVVMLTEPAFDPEKYIMVQPSDDADW
HHHHHHHHHHHHHHHCCCCEEEEEECCCEEEHHEEEHHHCCCCCCCCCEEEEECCCCCHH
YEKSMVATKDDLKQVQIAWSNSLPERAPAIAEFFANFQLTADDVSSLAFEISANGREPSD
HHHHHHCCHHHHHEEEEEECCCCCCCHHHHHHHHHCCEEEHHHHCCEEEEEECCCCCHHH
VAAEWVAANSDRVDAMLGL
HHHHHHHCCCCCCHHHHCC
>Mature Secondary Structure 
TLKMKLMTAALASVVSVPAFAEEVKIGVPTWTGAQAIAYVLGEVVTTRIGGTVDYVPGN
EEEHHHHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCC
NATIFQAMDQGEGDIDVHPDVWLPNQESFTKQYVDEAGTVTLSTNPYQGNQGFCVSKDFA
CCEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC
AANDITDIADLGRPDVAALMDSDGNGLGEMWIGAPGWASANVNEVKVRDYGLLDFIEPIR
CCCCCHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHH
AEEAVKTARIKDSIAKGEGYAFYCYEPHAVWYMFDVVMLTEPAFDPEKYIMVQPSDDADW
HHHHHHHHHHHHHHHCCCCEEEEEECCCEEEHHEEEHHHCCCCCCCCCEEEEECCCCCHH
YEKSMVATKDDLKQVQIAWSNSLPERAPAIAEFFANFQLTADDVSSLAFEISANGREPSD
HHHHHHCCHHHHHEEEEEECCCCCCCHHHHHHHHHCCEEEHHHHCCEEEEEECCCCCHHH
VAAEWVAANSDRVDAMLGL
HHHHHHHCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-proline [Periplasm]; H2O [C]

Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA