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The map label for this gene is nusB [H]

Identifier: 110679100

GI number: 110679100

Start: 1732315

End: 1732752

Strand: Direct

Name: nusB [H]

Synonym: RD1_1804

Alternate gene names: 110679100

Gene position: 1732315-1732752 (Clockwise)

Preceding gene: 110679099

Following gene: 110679101

Centisome position: 41.91

GC content: 60.5

Gene sequence:

>438_bases
ATGAAATCTGCCGCGCGGCTTTATGCGGTGCAGGCGCTGTTTCAGATGGAGCATTCGGGTCAGACCATTGAAGCCGTGCG
GCGCGAATTTCTCGACCATCGCTTCGGAGAGACATACGACGGGCAAGAGATGCTGGACGGCGACGTGGACCTGTTTGGAG
CAGTGATCGAGGGGGCAGTGAATTATCAGGCCCCGATTGATCAGATGACCGACCGCGCCTTGGTGGCGAAATGGCCCCTG
GGGCGCATCGACCCGACGCTGCGTGCCCTGTTTCGCGCCGCTGGCGCGGAATTGAATGGCAAGGACACGCCGCCCAAGGT
TGTGATTTCGGAATATGTAGATGTGGCGCGGGCGTTTTTCGAGGACGGAAAAGAGCCGAAACTGGTCAACGGCGTGCTGG
ACCACATGGCGCGCGAGGCACGGCCCGACGCCTTTTGA

Upstream 100 bases:

>100_bases
AGCCGCTGGGTCAAACGATCCGGATGGCTGGCGATACGGACGGAACTAACACAGTATGAGCGCGTTTCACGGGAACCTGT
CGGGCAATCAGCGCCGCAAG

Downstream 100 bases:

>100_bases
GGCTTGCCGGGCGCGTCGAGCGGGCTATTTGGCGACAGGAAGGGAACGAACGTCATGCCGCGTGTTTTCAAACTGTACCT
GATGAGTGCGCTGAATGGTT

Product: N utilization substance protein B-like protein, putative

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKSAARLYAVQALFQMEHSGQTIEAVRREFLDHRFGETYDGQEMLDGDVDLFGAVIEGAVNYQAPIDQMTDRALVAKWPL
GRIDPTLRALFRAAGAELNGKDTPPKVVISEYVDVARAFFEDGKEPKLVNGVLDHMAREARPDAF

Sequences:

>Translated_145_residues
MKSAARLYAVQALFQMEHSGQTIEAVRREFLDHRFGETYDGQEMLDGDVDLFGAVIEGAVNYQAPIDQMTDRALVAKWPL
GRIDPTLRALFRAAGAELNGKDTPPKVVISEYVDVARAFFEDGKEPKLVNGVLDHMAREARPDAF
>Mature_145_residues
MKSAARLYAVQALFQMEHSGQTIEAVRREFLDHRFGETYDGQEMLDGDVDLFGAVIEGAVNYQAPIDQMTDRALVAKWPL
GRIDPTLRALFRAAGAELNGKDTPPKVVISEYVDVARAFFEDGKEPKLVNGVLDHMAREARPDAF

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 16154; Mature: 16154

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAARLYAVQALFQMEHSGQTIEAVRREFLDHRFGETYDGQEMLDGDVDLFGAVIEGAV
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHC
NYQAPIDQMTDRALVAKWPLGRIDPTLRALFRAAGAELNGKDTPPKVVISEYVDVARAFF
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
EDGKEPKLVNGVLDHMAREARPDAF
HCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKSAARLYAVQALFQMEHSGQTIEAVRREFLDHRFGETYDGQEMLDGDVDLFGAVIEGAV
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHC
NYQAPIDQMTDRALVAKWPLGRIDPTLRALFRAAGAELNGKDTPPKVVISEYVDVARAFF
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
EDGKEPKLVNGVLDHMAREARPDAF
HCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA