| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679101
Identifier: 110679101
GI number: 110679101
Start: 1732756
End: 1733061
Strand: Direct
Name: 110679101
Synonym: RD1_1805
Alternate gene names: NA
Gene position: 1732756-1733061 (Clockwise)
Preceding gene: 110679100
Following gene: 110679102
Centisome position: 41.92
GC content: 54.25
Gene sequence:
>306_bases TTGCCGGGCGCGTCGAGCGGGCTATTTGGCGACAGGAAGGGAACGAACGTCATGCCGCGTGTTTTCAAACTGTACCTGAT GAGTGCGCTGAATGGTTTTGGCATTTCGCTGGCCTTCGTGGCATTGATCCTTGTCTTTAACATCGCAAACCTGCGCCATC TCGTCGGTACATCCGATATCGGCGTTCTGGCCACGGTCGCGTTCTGGATTCTGAATGGAATCGTCTTTTCCGGCGTTCAA TTTGCCTGGGCTTTGTCGCAGATGGTACGTGTTGATCCGTCTGAACTGGATGAAACCGGCCGCTAG
Upstream 100 bases:
>100_bases TGTGGCGCGGGCGTTTTTCGAGGACGGAAAAGAGCCGAAACTGGTCAACGGCGTGCTGGACCACATGGCGCGCGAGGCAC GGCCCGACGCCTTTTGAGGC
Downstream 100 bases:
>100_bases CCGGGTCGTTTGTGGCAAAATATTAAGAAATTCTGCCTAAGGTCGCTTTTATCGCCATATCAAACGGCATCGGCACTGGA CATTTTTTTTCCAAATGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MPGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDIGVLATVAFWILNGIVFSGVQ FAWALSQMVRVDPSELDETGR
Sequences:
>Translated_101_residues MPGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDIGVLATVAFWILNGIVFSGVQ FAWALSQMVRVDPSELDETGR >Mature_100_residues PGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDIGVLATVAFWILNGIVFSGVQF AWALSQMVRVDPSELDETGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10876; Mature: 10745
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH GVLATVAFWILNGIVFSGVQFAWALSQMVRVDPSELDETGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC >Mature Secondary Structure PGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH GVLATVAFWILNGIVFSGVQFAWALSQMVRVDPSELDETGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA