Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679101

Identifier: 110679101

GI number: 110679101

Start: 1732756

End: 1733061

Strand: Direct

Name: 110679101

Synonym: RD1_1805

Alternate gene names: NA

Gene position: 1732756-1733061 (Clockwise)

Preceding gene: 110679100

Following gene: 110679102

Centisome position: 41.92

GC content: 54.25

Gene sequence:

>306_bases
TTGCCGGGCGCGTCGAGCGGGCTATTTGGCGACAGGAAGGGAACGAACGTCATGCCGCGTGTTTTCAAACTGTACCTGAT
GAGTGCGCTGAATGGTTTTGGCATTTCGCTGGCCTTCGTGGCATTGATCCTTGTCTTTAACATCGCAAACCTGCGCCATC
TCGTCGGTACATCCGATATCGGCGTTCTGGCCACGGTCGCGTTCTGGATTCTGAATGGAATCGTCTTTTCCGGCGTTCAA
TTTGCCTGGGCTTTGTCGCAGATGGTACGTGTTGATCCGTCTGAACTGGATGAAACCGGCCGCTAG

Upstream 100 bases:

>100_bases
TGTGGCGCGGGCGTTTTTCGAGGACGGAAAAGAGCCGAAACTGGTCAACGGCGTGCTGGACCACATGGCGCGCGAGGCAC
GGCCCGACGCCTTTTGAGGC

Downstream 100 bases:

>100_bases
CCGGGTCGTTTGTGGCAAAATATTAAGAAATTCTGCCTAAGGTCGCTTTTATCGCCATATCAAACGGCATCGGCACTGGA
CATTTTTTTTCCAAATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MPGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDIGVLATVAFWILNGIVFSGVQ
FAWALSQMVRVDPSELDETGR

Sequences:

>Translated_101_residues
MPGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDIGVLATVAFWILNGIVFSGVQ
FAWALSQMVRVDPSELDETGR
>Mature_100_residues
PGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDIGVLATVAFWILNGIVFSGVQF
AWALSQMVRVDPSELDETGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10876; Mature: 10745

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
GVLATVAFWILNGIVFSGVQFAWALSQMVRVDPSELDETGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure 
PGASSGLFGDRKGTNVMPRVFKLYLMSALNGFGISLAFVALILVFNIANLRHLVGTSDI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
GVLATVAFWILNGIVFSGVQFAWALSQMVRVDPSELDETGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA