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The map label for this gene is 110679081

Identifier: 110679081

GI number: 110679081

Start: 1712196

End: 1712915

Strand: Reverse

Name: 110679081

Synonym: RD1_1784

Alternate gene names: NA

Gene position: 1712915-1712196 (Counterclockwise)

Preceding gene: 110679104

Following gene: 110679077

Centisome position: 41.44

GC content: 65.56

Gene sequence:

>720_bases
ATGACGAAACCAATTGCCTTTCTTGCCGTGCTGCTCTGCCTGACCTTTGCGGGGTCCACCCTCTGGGTGCCTGATTTTGG
CGGTTTTGACGCTGACCAGTTCCCGATCCCGCAAATGGACCCGCCGGTGCAACCCGCAGGCTATGCCTTTGCGATCTGGG
GCATCATCTATCTGTGGTTGCTGCTGGGGATGGGCTTTGGCCTGTGGAAACGCCGCGAGGACCCCACATGGCACGCCATG
CGCGCGCCGCTCTGCGTGTCACTGGCGGTCGGCTCCATCTGGTTGCCGGTGGCTGTCGTCAGCCCGGTCTGGGCCGCGAT
CCTGATCTGGGCCATGCTGATCCCCGCGCTGATCGCGCTGTTTCGCGCACCACGCGATGATCGGGGCTGGGCGCTGGGGC
CGGTCGGGCTTTATGCGGGCTGGCTGAGTGCTGCAAGCTGTGTCGCCCTCGGGCTGGTGGCCGCGGGCTATGGATACCTT
GATGACGAGACCGCGGCCTTCGCCTTCATATTCCTGGCCCTGCTGATTGCCTCGGCGGTGCAAAACCAACTGCGCCGCGC
GCCAAGCTACGGCATCGCCGTCATCTGGGCGCTGGTCGCAATCGTCGTACAGAACATGGCCAGCTATCCCACCGTTGCAG
CGCTCGCCGGGGGTGGCGCATTGGCCCTGACGCTGCCGGTCTGGAAGGCGTGGCGCGCGGGCAGAGCAGCCTCCGCCTAG

Upstream 100 bases:

>100_bases
TTGAAAGCTCTAGACCTAACGACCAAACGCTGGGGGCCGGTTACGCCACCGCGCGCTGCCTTAATCTGAACAGCGCATTT
TCGCGCGCAAAGGACCAACC

Downstream 100 bases:

>100_bases
AACGTCTGACGAGATAGCTGAAACATCAGTCACCTCGTAACGCATTGAGATCATTCATTTCAGGCCGCGTTACGTGACCA
AGGCTTATCGCACGACGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTKPIAFLAVLLCLTFAGSTLWVPDFGGFDADQFPIPQMDPPVQPAGYAFAIWGIIYLWLLLGMGFGLWKRREDPTWHAM
RAPLCVSLAVGSIWLPVAVVSPVWAAILIWAMLIPALIALFRAPRDDRGWALGPVGLYAGWLSAASCVALGLVAAGYGYL
DDETAAFAFIFLALLIASAVQNQLRRAPSYGIAVIWALVAIVVQNMASYPTVAALAGGGALALTLPVWKAWRAGRAASA

Sequences:

>Translated_239_residues
MTKPIAFLAVLLCLTFAGSTLWVPDFGGFDADQFPIPQMDPPVQPAGYAFAIWGIIYLWLLLGMGFGLWKRREDPTWHAM
RAPLCVSLAVGSIWLPVAVVSPVWAAILIWAMLIPALIALFRAPRDDRGWALGPVGLYAGWLSAASCVALGLVAAGYGYL
DDETAAFAFIFLALLIASAVQNQLRRAPSYGIAVIWALVAIVVQNMASYPTVAALAGGGALALTLPVWKAWRAGRAASA
>Mature_238_residues
TKPIAFLAVLLCLTFAGSTLWVPDFGGFDADQFPIPQMDPPVQPAGYAFAIWGIIYLWLLLGMGFGLWKRREDPTWHAMR
APLCVSLAVGSIWLPVAVVSPVWAAILIWAMLIPALIALFRAPRDDRGWALGPVGLYAGWLSAASCVALGLVAAGYGYLD
DETAAFAFIFLALLIASAVQNQLRRAPSYGIAVIWALVAIVVQNMASYPTVAALAGGGALALTLPVWKAWRAGRAASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25499; Mature: 25368

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPIAFLAVLLCLTFAGSTLWVPDFGGFDADQFPIPQMDPPVQPAGYAFAIWGIIYLWL
CCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LLGMGFGLWKRREDPTWHAMRAPLCVSLAVGSIWLPVAVVSPVWAAILIWAMLIPALIAL
HHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRAPRDDRGWALGPVGLYAGWLSAASCVALGLVAAGYGYLDDETAAFAFIFLALLIASAV
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
QNQLRRAPSYGIAVIWALVAIVVQNMASYPTVAALAGGGALALTLPVWKAWRAGRAASA
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKPIAFLAVLLCLTFAGSTLWVPDFGGFDADQFPIPQMDPPVQPAGYAFAIWGIIYLWL
CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LLGMGFGLWKRREDPTWHAMRAPLCVSLAVGSIWLPVAVVSPVWAAILIWAMLIPALIAL
HHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRAPRDDRGWALGPVGLYAGWLSAASCVALGLVAAGYGYLDDETAAFAFIFLALLIASAV
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
QNQLRRAPSYGIAVIWALVAIVVQNMASYPTVAALAGGGALALTLPVWKAWRAGRAASA
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA