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The map label for this gene is mtrC [H]

Identifier: 110679077

GI number: 110679077

Start: 1707020

End: 1708258

Strand: Reverse

Name: mtrC [H]

Synonym: RD1_1779

Alternate gene names: 110679077

Gene position: 1708258-1707020 (Counterclockwise)

Preceding gene: 110679081

Following gene: 110679076

Centisome position: 41.33

GC content: 63.84

Gene sequence:

>1239_bases
ATGCGTATTTTTTCCATCGTTGCAGCGATTGCAGTGGCGGCGGCTTTGTACTTTGCCATCGTTGATCGCGGCGCTCTGCT
GGCCCTGTTGGGACAGGATGCCCCCGCCCAGACCGGCGACGATTCGCCGGAAGCGGCGGCGCAAGATACCGTCCCGAGCA
GTGATCTGGTCAAGGTCGTGGTGCAAAGGTCGGTGGCCCAGGCCATTGAAACAGCCGTGTCACTGCGGGGCGAAACGCGG
GCCGCGCGGGTCGTGGATGTGAAATCCGAAACATCCGCCATCGTGATTTCCGACCCCCTGCGCAAGGGCGAGAATGTGGA
GAAGGGTCAGATCCTGTGCCGTCTTGACGAATCCACACGCGGCGCGGCGCTGGCACAGGCCAAGGCACAGTTGGAGGAGG
CCCGCGCACGCGCGCCCGAGGCGCAGGCACGTCTGGATCAGGCCATCGCGCAACTGGCCGAGGCGCGGATCAATCAAAAC
GCATCAAGCAAGTTGAGCGAGGGCGGATTTGCCTCAACCACCCGCGTGGCAAATGCCGAGGCCAATGTCGCAACCGCGCT
CGCATCCGTCGAGTCCGCGCGTGCGGGTGTGCAGGCGGCACAGGCCGGGATCGAAAGCGCGCAGGCCAATGTCGCCACCG
CCGAAAAAGAGCTGGAACGCCTGCTGATCCGCGCGCCTTTCGCGGGCCTGCTGGAAAGCGACACGGCGGAACTCGGCACG
CTTTTGCAGCCCGGTGATCTCTGCGCGACGGTGATACAGCTCAACCCCATCAAACTCGTGGCGTTCGTGCCCGAAACCGA
GGTGGAGCGGGTCAAGATCGGTGCGCAGGCGCGCGCCACGCTCGCCACCGGGCAGGACAACGTGACCGGGCAGGTCACAT
TCCTGTCGCGCGCCGCGGACGAAATGACCCGTACCTTCCTCGTCGAGATCGAGGTGGCCAATACGGATATGAACATCTCC
GACGGTCAGACCGCGGAAATCCTCGTCGCGGGCGCAGGTGCCAAGGCGCATCTGCTGCCGCAATCCGCGCTGACCCTGAA
CGATGATGGCGTGCTCGGCATCCGCAGCATCGACGAGAACGCCATCGTCGGATTCCATCCCGTGAAATTGCTGCGCGACA
CACCGGAAGGCGTCTGGCTGACCGGGCTGGCGGACAGCGTTGATGTGATCGTTCTGGGTCAGGAATATGTGATTGCAGGT
GTTCGCGTCGCCCCCACCTACCGGGATCTTGTGCAATGA

Upstream 100 bases:

>100_bases
CTGAACTGATCAGTTTAGCGCGAAAACCAGTTTTCAATCGCCAGAGAGACCACCCAACGCGGCGCATTGACGGCTGAAAA
TCCACAACGAGGCAGCTTTA

Downstream 100 bases:

>100_bases
CCGGCATCGTCGACTGGGCCGCCGGGCGCGCACGCATGATCGTGGCGTTTATCCTGCTGAGCATCGTGGTCGGCGCATTT
TCCTACACCACATTGCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MRIFSIVAAIAVAAALYFAIVDRGALLALLGQDAPAQTGDDSPEAAAQDTVPSSDLVKVVVQRSVAQAIETAVSLRGETR
AARVVDVKSETSAIVISDPLRKGENVEKGQILCRLDESTRGAALAQAKAQLEEARARAPEAQARLDQAIAQLAEARINQN
ASSKLSEGGFASTTRVANAEANVATALASVESARAGVQAAQAGIESAQANVATAEKELERLLIRAPFAGLLESDTAELGT
LLQPGDLCATVIQLNPIKLVAFVPETEVERVKIGAQARATLATGQDNVTGQVTFLSRAADEMTRTFLVEIEVANTDMNIS
DGQTAEILVAGAGAKAHLLPQSALTLNDDGVLGIRSIDENAIVGFHPVKLLRDTPEGVWLTGLADSVDVIVLGQEYVIAG
VRVAPTYRDLVQ

Sequences:

>Translated_412_residues
MRIFSIVAAIAVAAALYFAIVDRGALLALLGQDAPAQTGDDSPEAAAQDTVPSSDLVKVVVQRSVAQAIETAVSLRGETR
AARVVDVKSETSAIVISDPLRKGENVEKGQILCRLDESTRGAALAQAKAQLEEARARAPEAQARLDQAIAQLAEARINQN
ASSKLSEGGFASTTRVANAEANVATALASVESARAGVQAAQAGIESAQANVATAEKELERLLIRAPFAGLLESDTAELGT
LLQPGDLCATVIQLNPIKLVAFVPETEVERVKIGAQARATLATGQDNVTGQVTFLSRAADEMTRTFLVEIEVANTDMNIS
DGQTAEILVAGAGAKAHLLPQSALTLNDDGVLGIRSIDENAIVGFHPVKLLRDTPEGVWLTGLADSVDVIVLGQEYVIAG
VRVAPTYRDLVQ
>Mature_412_residues
MRIFSIVAAIAVAAALYFAIVDRGALLALLGQDAPAQTGDDSPEAAAQDTVPSSDLVKVVVQRSVAQAIETAVSLRGETR
AARVVDVKSETSAIVISDPLRKGENVEKGQILCRLDESTRGAALAQAKAQLEEARARAPEAQARLDQAIAQLAEARINQN
ASSKLSEGGFASTTRVANAEANVATALASVESARAGVQAAQAGIESAQANVATAEKELERLLIRAPFAGLLESDTAELGT
LLQPGDLCATVIQLNPIKLVAFVPETEVERVKIGAQARATLATGQDNVTGQVTFLSRAADEMTRTFLVEIEVANTDMNIS
DGQTAEILVAGAGAKAHLLPQSALTLNDDGVLGIRSIDENAIVGFHPVKLLRDTPEGVWLTGLADSVDVIVLGQEYVIAG
VRVAPTYRDLVQ

Specific function: Cell membrane lipoprotein, involved in cell membrane permeability to hydrophobic compounds such as antibiotics, dyes and detergents [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 43068; Mature: 43068

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFSIVAAIAVAAALYFAIVDRGALLALLGQDAPAQTGDDSPEAAAQDTVPSSDLVKVV
CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
VQRSVAQAIETAVSLRGETRAARVVDVKSETSAIVISDPLRKGENVEKGQILCRLDESTR
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCC
GAALAQAKAQLEEARARAPEAQARLDQAIAQLAEARINQNASSKLSEGGFASTTRVANAE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEECCCC
ANVATALASVESARAGVQAAQAGIESAQANVATAEKELERLLIRAPFAGLLESDTAELGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHC
LLQPGDLCATVIQLNPIKLVAFVPETEVERVKIGAQARATLATGQDNVTGQVTFLSRAAD
CCCCHHHHHHHEEECCEEEEEECCCCCCHHEEECCHHEEEEECCCCCCCEEEEEHHHHHH
EMTRTFLVEIEVANTDMNISDGQTAEILVAGAGAKAHLLPQSALTLNDDGVLGIRSIDEN
HHCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCEEECCCCEEEEEECCCC
AIVGFHPVKLLRDTPEGVWLTGLADSVDVIVLGQEYVIAGVRVAPTYRDLVQ
CEEEEEHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEEEEECCCHHHHCC
>Mature Secondary Structure
MRIFSIVAAIAVAAALYFAIVDRGALLALLGQDAPAQTGDDSPEAAAQDTVPSSDLVKVV
CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
VQRSVAQAIETAVSLRGETRAARVVDVKSETSAIVISDPLRKGENVEKGQILCRLDESTR
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCC
GAALAQAKAQLEEARARAPEAQARLDQAIAQLAEARINQNASSKLSEGGFASTTRVANAE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEECCCC
ANVATALASVESARAGVQAAQAGIESAQANVATAEKELERLLIRAPFAGLLESDTAELGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHC
LLQPGDLCATVIQLNPIKLVAFVPETEVERVKIGAQARATLATGQDNVTGQVTFLSRAAD
CCCCHHHHHHHEEECCEEEEEECCCCCCHHEEECCHHEEEEECCCCCCCEEEEEHHHHHH
EMTRTFLVEIEVANTDMNISDGQTAEILVAGAGAKAHLLPQSALTLNDDGVLGIRSIDEN
HHCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCCCCEEECCCCEEEEEECCCC
AIVGFHPVKLLRDTPEGVWLTGLADSVDVIVLGQEYVIAGVRVAPTYRDLVQ
CEEEEEHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8196548 [H]