Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679104

Identifier: 110679104

GI number: 110679104

Start: 1734061

End: 1734246

Strand: Reverse

Name: 110679104

Synonym: RD1_1808

Alternate gene names: NA

Gene position: 1734246-1734061 (Counterclockwise)

Preceding gene: 110679107

Following gene: 110679081

Centisome position: 41.96

GC content: 56.45

Gene sequence:

>186_bases
ATGGGCATTGACACCGAACGGGACATTGAGGCGAACCTGCAAATCGGCCCGACAAACAAAGGCATGGTGCGCATTTACGT
CGAGGCCGAAGGCGCCGAGATTCCAATGGATTTCACGCCGGATGACGCCGAAGAAATCGCCGAGGAAATCGTGGCTGCTG
CCAATCGTGCGCGGGCGATGAAATAA

Upstream 100 bases:

>100_bases
TCTGAGAATCACCTCTTTCATATGCCCAGAGGACCCGGCCGATGCTTGCGTTGCAAGCCGCTACGCGCTAGCCATGCGGC
AATACGTAAAGGAGGCCGCG

Downstream 100 bases:

>100_bases
CCGCGACGTGATCAGGAGCAGGCCAACTGCATGTCCGGGTCGCGCAGACTGTGCAGCCGACGCGCTGCGGTGATCGCGAA
TTTCTGAACAAGCTGTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MGIDTERDIEANLQIGPTNKGMVRIYVEAEGAEIPMDFTPDDAEEIAEEIVAAANRARAMK

Sequences:

>Translated_61_residues
MGIDTERDIEANLQIGPTNKGMVRIYVEAEGAEIPMDFTPDDAEEIAEEIVAAANRARAMK
>Mature_60_residues
GIDTERDIEANLQIGPTNKGMVRIYVEAEGAEIPMDFTPDDAEEIAEEIVAAANRARAMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6679; Mature: 6547

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIDTERDIEANLQIGPTNKGMVRIYVEAEGAEIPMDFTPDDAEEIAEEIVAAANRARAM
CCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
K
C
>Mature Secondary Structure 
GIDTERDIEANLQIGPTNKGMVRIYVEAEGAEIPMDFTPDDAEEIAEEIVAAANRARAM
CCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA