Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is argK [C]

Identifier: 110678982

GI number: 110678982

Start: 1616365

End: 1617354

Strand: Direct

Name: argK [C]

Synonym: RD1_1679

Alternate gene names: 110678982

Gene position: 1616365-1617354 (Clockwise)

Preceding gene: 110678980

Following gene: 110678983

Centisome position: 39.11

GC content: 64.34

Gene sequence:

>990_bases
ATGGAGACGGCGCAGCTGGCGGCAGGCATCATAAAGGGCGAACGTCGTGCCTTGGCGCGGGGAATCACCCTGGTGGAAAG
TGCGCGCGAGGATCACCGGGTGCAGGCCAGCGCCCTGTTGCAGCACCTGCCCCGGGACCGGCAGGCGCTGCGTATCGGGC
TGTCGGGCACGCCGGGCGTCGGAAAATCCACCTTTGTCGAAAGCTTTGGCATGATGCTGGTGGAAAAGGGCCTGCGGGTC
GCCGTTCTGGCGGTTGATCCGTCATCGTCCCGCTCGGGCGGGTCGATCCTTGGGGATAAAACACGGATGGACCGGCTGGC
CCGTGCGCCCAACGCCTTCATCCGCCCCTCGCCGAGCCAGACGCACCTTGGTGGCGTGGCGCGGCGCACGCGCGAGGCGG
TTGCGTTGTGCGAGGCGGCGGGGTTTGATGTGGTTTTGATCGAAACCGTGGGCGTGGGGCAATCCGAAACCGTGGTTGCG
GAAATTTCCGATCTCTTTCTGCTCTTGCTGGCCCCGGCGGGCGGGGATGAATTGCAGGGCGTCAAACGCGGAATCATGGA
GATCGCGGATATGATTCTGATCAACAAGGCGGACGGGGATCTCAAGCCTGCGGCAACGCGGACCTGTGCGGATTATGCGG
GGGCCTTGCGGCTTTTGCGCAAGCGGCCACAGGATCCCGATGGATTTCCCAAGGCGGCCATGGTGTCGGCCCTCAACAGC
ATAGGTCTGGCCGATGTCTGGGGCGATATCGAAACGCTGACCGCATGGCGGCGCGCGCAGGGGTTTTGGGACCGCACCCG
CGCTGCTCAGGCGCGCTACTGGTTTGGTCAGGACGTGCGCAACGCCCTGCTTGAACAGTTGGAAACCCCGAAGGCACGCG
CGGCCTTGCAGTCCTTTGGCGACAAGGTCGCAGCTGGTGAGATGCCCCCTTCTGTCGCCGCACAGTCGTTTTTGCAGGGT
CTTGAGCGGCGCGAGGGATCAAAGTCGTGA

Upstream 100 bases:

>100_bases
AGGACATGTGGCCTCTTAGCCCATGGGTGCAGGCGCGCCAAGCACTGGACATTTCCCGGCGGCTGCCGGAAAACCATCGG
GGAACAAAAGGGCAGGGCAT

Downstream 100 bases:

>100_bases
TTTTGCGCCCGGCTTGGGTTGACCGGACGTGCGATTCCCACTAAAGCCAGCGAACGAATTTCCGGGGTTCGGCGTGACGC
CAGCCCCTTTGTCGTTTACC

Product: arginine/ornithine transport system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGVGKSTFVESFGMMLVEKGLRV
AVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQTHLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVA
EISDLFLLLLAPAGGDELQGVKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS
IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFGDKVAAGEMPPSVAAQSFLQG
LERREGSKS

Sequences:

>Translated_329_residues
METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGVGKSTFVESFGMMLVEKGLRV
AVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQTHLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVA
EISDLFLLLLAPAGGDELQGVKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS
IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFGDKVAAGEMPPSVAAQSFLQG
LERREGSKS
>Mature_329_residues
METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGVGKSTFVESFGMMLVEKGLRV
AVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQTHLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVA
EISDLFLLLLAPAGGDELQGVKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS
IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFGDKVAAGEMPPSVAAQSFLQG
LERREGSKS

Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]

COG id: COG1703

COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArgK family [H]

Homologues:

Organism=Homo sapiens, GI26892295, Length=333, Percent_Identity=46.5465465465465, Blast_Score=284, Evalue=8e-77,
Organism=Escherichia coli, GI1789285, Length=277, Percent_Identity=48.014440433213, Blast_Score=251, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI71994271, Length=328, Percent_Identity=41.1585365853659, Blast_Score=245, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI71994275, Length=277, Percent_Identity=42.9602888086643, Blast_Score=229, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005129
- InterPro:   IPR003593 [H]

Pfam domain/function: PF03308 ArgK [H]

EC number: 2.7.-.- [C]

Molecular weight: Translated: 35266; Mature: 35266

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCC
GKSTFVESFGMMLVEKGLRVAVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQ
CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
THLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVAEISDLFLLLLAPAGGDELQG
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
VKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS
HHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFG
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
DKVAAGEMPPSVAAQSFLQGLERREGSKS
CHHCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
METAQLAAGIIKGERRALARGITLVESAREDHRVQASALLQHLPRDRQALRIGLSGTPGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCC
GKSTFVESFGMMLVEKGLRVAVLAVDPSSSRSGGSILGDKTRMDRLARAPNAFIRPSPSQ
CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
THLGGVARRTREAVALCEAAGFDVVLIETVGVGQSETVVAEISDLFLLLLAPAGGDELQG
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
VKRGIMEIADMILINKADGDLKPAATRTCADYAGALRLLRKRPQDPDGFPKAAMVSALNS
HHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
IGLADVWGDIETLTAWRRAQGFWDRTRAAQARYWFGQDVRNALLEQLETPKARAALQSFG
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
DKVAAGEMPPSVAAQSFLQGLERREGSKS
CHHCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Arg [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8421698; 11259647 [H]