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The map label for this gene is yhgI [C]

Identifier: 110678955

GI number: 110678955

Start: 1589135

End: 1589698

Strand: Reverse

Name: yhgI [C]

Synonym: RD1_1650

Alternate gene names: 110678955

Gene position: 1589698-1589135 (Counterclockwise)

Preceding gene: 110678956

Following gene: 110678954

Centisome position: 38.46

GC content: 58.51

Gene sequence:

>564_bases
ATGTTTATCCAGACCGAATCCACGCCGAACCCTGCGACGCTCAAGTTTCTGCCGGGTCAGACCGTTCTTGAAATGGGGAC
CGCCGATTTTCCCAGTGCGGAGACAGCGGATAAATCCCCGCTGGCCGAACGCGTCTTTGCGGTTGAGGGCGTGACCGGTG
TGTTTTTCGGGACCGACTTTGTCACCGTGACCAAGGCGGATAATGTGGATTGGGACCATATCAAACCTGCCCTGCTTGGC
GCGATCATGGAGCATTTCCAATCCGGCCAACCTGTCATGGCCGGCGATCACACACCGACCTCCGGCCATGCCGAGCACAC
AGGGGATGACGGTGTAATCGTCAACCAGATCAAGGAGTTGCTGGACACCCGTGTACGCCCTGCTGTTGCGCAGGATGGTG
GTGACATCACCTTTCACGGGTTCGAACGGGGCGTCGTTTATCTGCATATGCAGGGTGCCTGCGCCGGTTGTCCGTCCTCT
ACGCTGACGCTGAAGATGGGGATCGAAAACCTGCTGCGTCACTATATCCCCGAAGTGACCGAGGTGCGCCCGGTCGCTAC
CTGA

Upstream 100 bases:

>100_bases
TGCCTGATCAAGGTTTTTCGCATTGTGCTTTAGAACGGTTCTAAACCTTGACTTGCGCAGATGTGATCCGCATATCTAGG
TCAACCTCAGGAGATTGCCG

Downstream 100 bases:

>100_bases
CACCGGACGCAGCCTACCCGCCCCGAAATCACTGAAAGACCTGACAGTGACAAGCGCGCCCGTTGTCCTCGCCTTTGATA
CCGCGTCGGCGTGCTGCGCT

Product: NifU-like domain-containing protein

Products: NA

Alternate protein names: Nitrogen-Fixing NifU Domain Protein; NifU Domain Protein; Nitrogen-Fixing NifU-Like; NifU Domain-Containing Protein; NifU-Like Protein; Nitrogen Fixation Protein; NifU-Like Domain Protein; NifU Related Protein; NifU Protein; Nitrogen-Fixing NifU Domain-Containing Protein; NifU-Like Domain-Containing Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing Protein NifU; Iron-Sulfur Cluster Assembly Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; NifU-Like Nitrogen Fixation Protein; Nitrogen-Fixing NifU C-Terminal; Nitrogen Fixation Protein NifU; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAETADKSPLAERVFAVEGVTGVFFGTDFVTVTKADNVDWDHIKPALLG
AIMEHFQSGQPVMAGDHTPTSGHAEHTGDDGVIVNQIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSS
TLTLKMGIENLLRHYIPEVTEVRPVAT

Sequences:

>Translated_187_residues
MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAETADKSPLAERVFAVEGVTGVFFGTDFVTVTKADNVDWDHIKPALLG
AIMEHFQSGQPVMAGDHTPTSGHAEHTGDDGVIVNQIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSS
TLTLKMGIENLLRHYIPEVTEVRPVAT
>Mature_187_residues
MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAETADKSPLAERVFAVEGVTGVFFGTDFVTVTKADNVDWDHIKPALLG
AIMEHFQSGQPVMAGDHTPTSGHAEHTGDDGVIVNQIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSS
TLTLKMGIENLLRHYIPEVTEVRPVAT

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=186, Percent_Identity=53.763440860215, Blast_Score=201, Evalue=3e-52,
Organism=Homo sapiens, GI50593021, Length=186, Percent_Identity=53.763440860215, Blast_Score=201, Evalue=4e-52,
Organism=Homo sapiens, GI50593023, Length=103, Percent_Identity=53.3980582524272, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI50593019, Length=103, Percent_Identity=53.3980582524272, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17541876, Length=185, Percent_Identity=52.4324324324324, Blast_Score=196, Evalue=6e-51,
Organism=Saccharomyces cerevisiae, GI6322811, Length=201, Percent_Identity=36.318407960199, Blast_Score=128, Evalue=6e-31,
Organism=Drosophila melanogaster, GI45551492, Length=186, Percent_Identity=55.9139784946236, Blast_Score=203, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24643765, Length=186, Percent_Identity=55.9139784946236, Blast_Score=203, Evalue=7e-53,
Organism=Drosophila melanogaster, GI45556188, Length=186, Percent_Identity=55.9139784946236, Blast_Score=203, Evalue=7e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20104; Mature: 20104

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAETADKSPLAERVFAVEGVTGVFFGTDF
CEECCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCE
VTVTKADNVDWDHIKPALLGAIMEHFQSGQPVMAGDHTPTSGHAEHTGDDGVIVNQIKEL
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHH
LDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT
HHHHCCCHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHCCCHH
EVRPVAT
CCCCCCC
>Mature Secondary Structure
MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAETADKSPLAERVFAVEGVTGVFFGTDF
CEECCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCE
VTVTKADNVDWDHIKPALLGAIMEHFQSGQPVMAGDHTPTSGHAEHTGDDGVIVNQIKEL
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHH
LDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT
HHHHCCCHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHCCCHH
EVRPVAT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA