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The map label for this gene is 110678956

Identifier: 110678956

GI number: 110678956

Start: 1589928

End: 1590383

Strand: Reverse

Name: 110678956

Synonym: RD1_1652

Alternate gene names: NA

Gene position: 1590383-1589928 (Counterclockwise)

Preceding gene: 110678958

Following gene: 110678955

Centisome position: 38.48

GC content: 57.02

Gene sequence:

>456_bases
ATGCGCAAGTTTTTGGTGGTACTCGATGACAGCAGTGAATGTCTGAATGCGATGCGATTTGCCGCGATGCGCGCCGCACG
CACAGGCGGTGGTGTTCAGATTCTGTCGGTCATTCCCCCGGATGAGTTCAACCACTGGATCGGTGTCGGCGAAGTCATGC
GCGAAGAAGCGCGCGAACGTATCGAAGTGCATTTTGAGGTCTTCGCGAAATGGATGCGGGACCGGCAGGGCATTGATCCT
GAACTGGTGATCCGTGAGGGGCAGGCCGTTGATGAAATCGTGGCACAGATCGCAGAAGACACTGAGATTGGCGTTTTGGT
TCTGGGTGCCGGCACAGGCAAGAAAGGTCCCGGCCCGCTGGTTACACAGCTGACCAAGAATGCCGGGGGCCTGCCCATTC
CAATCACGGTCGTGCCGGGCGATCTGAGCAAAGAGAAACTCGAAGCAATCACCTGA

Upstream 100 bases:

>100_bases
CCTGATTTGCAAAGCTGTCCAGTGACTTTCGCGCCTAAATTGCGATTGCGTAAGCCTGTTTCTGCGGTCATGATCTGCGC
CAACAGGGGAGCGTGCGATC

Downstream 100 bases:

>100_bases
GCGCCGCCGCGGGCGCTGTGATCGGGGCGTATTGCGAAAACCCGCCAGCACGCGTTTAAAGCGCCCGGCGAAATATCTGG
GACGTCAAATATCACGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; UspA Protein; Uspa Domain-Containing Protein

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRKFLVVLDDSSECLNAMRFAAMRAARTGGGVQILSVIPPDEFNHWIGVGEVMREEARERIEVHFEVFAKWMRDRQGIDP
ELVIREGQAVDEIVAQIAEDTEIGVLVLGAGTGKKGPGPLVTQLTKNAGGLPIPITVVPGDLSKEKLEAIT

Sequences:

>Translated_151_residues
MRKFLVVLDDSSECLNAMRFAAMRAARTGGGVQILSVIPPDEFNHWIGVGEVMREEARERIEVHFEVFAKWMRDRQGIDP
ELVIREGQAVDEIVAQIAEDTEIGVLVLGAGTGKKGPGPLVTQLTKNAGGLPIPITVVPGDLSKEKLEAIT
>Mature_151_residues
MRKFLVVLDDSSECLNAMRFAAMRAARTGGGVQILSVIPPDEFNHWIGVGEVMREEARERIEVHFEVFAKWMRDRQGIDP
ELVIREGQAVDEIVAQIAEDTEIGVLVLGAGTGKKGPGPLVTQLTKNAGGLPIPITVVPGDLSKEKLEAIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16431; Mature: 16431

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFLVVLDDSSECLNAMRFAAMRAARTGGGVQILSVIPPDEFNHWIGVGEVMREEARER
CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHCCHHHHHHHHHHHH
IEVHFEVFAKWMRDRQGIDPELVIREGQAVDEIVAQIAEDTEIGVLVLGAGTGKKGPGPL
HHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHH
VTQLTKNAGGLPIPITVVPGDLSKEKLEAIT
HHHHHCCCCCCCEEEEEECCCCCHHHHHHCC
>Mature Secondary Structure
MRKFLVVLDDSSECLNAMRFAAMRAARTGGGVQILSVIPPDEFNHWIGVGEVMREEARER
CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHCCHHHHHHHHHHHH
IEVHFEVFAKWMRDRQGIDPELVIREGQAVDEIVAQIAEDTEIGVLVLGAGTGKKGPGPL
HHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHH
VTQLTKNAGGLPIPITVVPGDLSKEKLEAIT
HHHHHCCCCCCCEEEEEECCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA