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The map label for this gene is 110678766

Identifier: 110678766

GI number: 110678766

Start: 1377623

End: 1378273

Strand: Reverse

Name: 110678766

Synonym: RD1_1449

Alternate gene names: NA

Gene position: 1378273-1377623 (Counterclockwise)

Preceding gene: 110678767

Following gene: 110678765

Centisome position: 33.35

GC content: 63.29

Gene sequence:

>651_bases
GTGACATATGACGCCCTTCAGGCTGCGGCTCTGACCCGGTCCCTGACCATCCTTGGCGGGTTCCATCCCGCAGCCGATGA
CGGGGTTCCGCCGGGTTTTCAGACCCTCTTGCTGCTCGGCCCACACGAACCCGGATTCTGGGCGAGTTTCACCCAAAGCC
CTGAATGGCAGGACGGCGCGCCTGACCCGATGGACCGCTGGTCGACGCGGGTCATTGACGCATGGGCCGCTGATCTGGAT
GCGCTGGCGCTTTATCCGTTTGGCGGGCCGCCCTTCAAACCGTTCTTTTCATGGGCGCTGAAAACCGGCCGGGTGCATGC
CTCTCCAATCATGTTGCTGGTCCACGACAGCGCCGGTTTGTTCGTGTCGTTCCGGGGCGCGCTTGCCCTGCGCGACAGGA
TCGACCTGCCGCCCAACCCTGCCAACCCGTGTCTCGGCTGTATCGATCAGCCCTGCACCACCACCTGCCCCGTCGATGCA
TTGGACGGGAAAAACTATGATGTGGTGGCCTGCAAGACATTCCTCGAACAAGCCGGGGGGCAGGACTGCATGGCGTATGG
CTGCGCGGCGCGGCGGGTTTGCCCGGTGTCGCAGCAATACCCGCGCACCTCGGCGCAATCGGCCTATCATATGACCACTT
TCAAAGGGTAG

Upstream 100 bases:

>100_bases
AACCTGCTGCCGGGCATGACGCCATGCAGGTGGGCCTTGAATGGCAGGATGACCGCCCGAGCAAGCTCGGCTGGTCGCTC
TCCCTGCCGTTCGTGCGCAA

Downstream 100 bases:

>100_bases
CGGATGCTTCGACTGATCCTGATGCGGCACGCGAAATCGGACTGGAACCATATCGGCACCGCTGACCACGACCGCCCGCT
CAACAAGCGCGGACGCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTYDALQAAALTRSLTILGGFHPAADDGVPPGFQTLLLLGPHEPGFWASFTQSPEWQDGAPDPMDRWSTRVIDAWAADLD
ALALYPFGGPPFKPFFSWALKTGRVHASPIMLLVHDSAGLFVSFRGALALRDRIDLPPNPANPCLGCIDQPCTTTCPVDA
LDGKNYDVVACKTFLEQAGGQDCMAYGCAARRVCPVSQQYPRTSAQSAYHMTTFKG

Sequences:

>Translated_216_residues
MTYDALQAAALTRSLTILGGFHPAADDGVPPGFQTLLLLGPHEPGFWASFTQSPEWQDGAPDPMDRWSTRVIDAWAADLD
ALALYPFGGPPFKPFFSWALKTGRVHASPIMLLVHDSAGLFVSFRGALALRDRIDLPPNPANPCLGCIDQPCTTTCPVDA
LDGKNYDVVACKTFLEQAGGQDCMAYGCAARRVCPVSQQYPRTSAQSAYHMTTFKG
>Mature_215_residues
TYDALQAAALTRSLTILGGFHPAADDGVPPGFQTLLLLGPHEPGFWASFTQSPEWQDGAPDPMDRWSTRVIDAWAADLDA
LALYPFGGPPFKPFFSWALKTGRVHASPIMLLVHDSAGLFVSFRGALALRDRIDLPPNPANPCLGCIDQPCTTTCPVDAL
DGKNYDVVACKTFLEQAGGQDCMAYGCAARRVCPVSQQYPRTSAQSAYHMTTFKG

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23324; Mature: 23192

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYDALQAAALTRSLTILGGFHPAADDGVPPGFQTLLLLGPHEPGFWASFTQSPEWQDGA
CCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCC
PDPMDRWSTRVIDAWAADLDALALYPFGGPPFKPFFSWALKTGRVHASPIMLLVHDSAGL
CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEECCEEEEEEECCCCE
FVSFRGALALRDRIDLPPNPANPCLGCIDQPCTTTCPVDALDGKNYDVVACKTFLEQAGG
EEEECCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCC
QDCMAYGCAARRVCPVSQQYPRTSAQSAYHMTTFKG
CHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TYDALQAAALTRSLTILGGFHPAADDGVPPGFQTLLLLGPHEPGFWASFTQSPEWQDGA
CHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCC
PDPMDRWSTRVIDAWAADLDALALYPFGGPPFKPFFSWALKTGRVHASPIMLLVHDSAGL
CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEECCEEEEEEECCCCE
FVSFRGALALRDRIDLPPNPANPCLGCIDQPCTTTCPVDALDGKNYDVVACKTFLEQAGG
EEEECCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCC
QDCMAYGCAARRVCPVSQQYPRTSAQSAYHMTTFKG
CHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA