Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678764

Identifier: 110678764

GI number: 110678764

Start: 1376723

End: 1376905

Strand: Reverse

Name: 110678764

Synonym: RD1_1447

Alternate gene names: NA

Gene position: 1376905-1376723 (Counterclockwise)

Preceding gene: 110678765

Following gene: 110678751

Centisome position: 33.31

GC content: 60.11

Gene sequence:

>183_bases
ATGGTCATGCCCTCTTCGGCCAGTTCGATCATGGTGTCGAGCACCTCTTTGATCATCTCCGGGTCCAGCGCAGAGGTCGG
TTCGTCAAACAACATGATCCGTGGCTTCATGCAGAGCGAGCGCGCAATGGCCACCCGCTGCTGTTGCCCGCCCGAAAGCT
GCCCGGGATATTTGCCCGCCTGA

Upstream 100 bases:

>100_bases
CGCCTCAGGCTCGTTCTGCTCGACGATCTGCCCGGCATCCATGAAGATCACCCGGTTGGCGACCTGACGCGCAAAGCCCA
TTTCGTGGGTCACGCAAAGC

Downstream 100 bases:

>100_bases
TCCGGGATTTTCACCTTTTCAAGGAAGTGCATCGCCGTTTCTTCGGCCTCTTTCTTAGGTATCTTGCGCACCCAGATCGG
CGCAAGCGTGCAATTCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA

Sequences:

>Translated_60_residues
MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA
>Mature_60_residues
MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6207; Mature: 6207

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
10.0 %Met     (Translated Protein)
16.7 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
10.0 %Met     (Mature Protein)
16.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA
CCCCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVMPSSASSIMVSSTSLIISGSSAEVGSSNNMIRGFMQSERAMATRCCCPPESCPGYLPA
CCCCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA