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The map label for this gene is nadD

Identifier: 110678569

GI number: 110678569

Start: 1205923

End: 1206522

Strand: Direct

Name: nadD

Synonym: RD1_1243

Alternate gene names: 110678569

Gene position: 1205923-1206522 (Clockwise)

Preceding gene: 110678568

Following gene: 110678570

Centisome position: 29.18

GC content: 64.5

Gene sequence:

>600_bases
GTGCGACAAGGCTTTCCGAAAGCGCGCGCAGGTGAGGTGATCGGGCTGTTTGGCGGTTCGTTTGATCCGGCACATCAGGG
CCATGCGCATATCACACGCGAGGCGCTCAAGAGGTTCGGACTTGACCGGGTCTGGTGGCTGGTCTCGCCCGGTAACCCGT
TGAAACCGCAGGGTCCGGCCCCGTTGGACACGCGGATGGCCCGTGCAAAGGCGATCATGCAGCACCCGCGCGTGATCATC
ACCGACGTCGAAACACGGCTTGGGACGCGCTATACGGCGGCGACGCTCGATCAGTTGTCGGCGCTTTATCCGGGGGTGCA
TTTCGTCTGGCTGATGGGGGCTGACAATCTGGCGCAGTTTCACAAATGGCAGCGCTGGCGTGACATCGCCAGCACCACGC
CGCTTGGGGTTCTTGCCCGACCGGGCGACAGAATCCCGGCGCGGATGAGCCCGGCTGCGGCGGTTTTTGGCCGCGCGCGC
ATACCGGGGCGCGCCTCGCAGCTTTTGGGACGTGCCGCCGCGCCGGCGTGGTGTTTTGTTAACGTCCCCATGGTAGAACA
ATCCTCATCCGCGATCCGGTCCAAGGGTGGCTGGGTCTGA

Upstream 100 bases:

>100_bases
GCAGGGCGGCGAGATAAAGCGCGGCGACGCGGTCATGCCATTGACAAGCGGGGCCCCGGCCTGATTGTAGGGCGCTGACC
ATCAGGCAAGGGAGCGATGG

Downstream 100 bases:

>100_bases
GGCTGCCTGCGTCCGCAATCGGTTCAAAATGATGGCCTTTGCACTGTTGTTTCTGCGCCCCGGCTGGGGGTAGGGTTTGA
CCATGACCAAGACACCTTGT

Product: nicotinic acid mononucleotide adenylyltransferase

Products: NA

Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRQGFPKARAGEVIGLFGGSFDPAHQGHAHITREALKRFGLDRVWWLVSPGNPLKPQGPAPLDTRMARAKAIMQHPRVII
TDVETRLGTRYTAATLDQLSALYPGVHFVWLMGADNLAQFHKWQRWRDIASTTPLGVLARPGDRIPARMSPAAAVFGRAR
IPGRASQLLGRAAAPAWCFVNVPMVEQSSSAIRSKGGWV

Sequences:

>Translated_199_residues
MRQGFPKARAGEVIGLFGGSFDPAHQGHAHITREALKRFGLDRVWWLVSPGNPLKPQGPAPLDTRMARAKAIMQHPRVII
TDVETRLGTRYTAATLDQLSALYPGVHFVWLMGADNLAQFHKWQRWRDIASTTPLGVLARPGDRIPARMSPAAAVFGRAR
IPGRASQLLGRAAAPAWCFVNVPMVEQSSSAIRSKGGWV
>Mature_199_residues
MRQGFPKARAGEVIGLFGGSFDPAHQGHAHITREALKRFGLDRVWWLVSPGNPLKPQGPAPLDTRMARAKAIMQHPRVII
TDVETRLGTRYTAATLDQLSALYPGVHFVWLMGADNLAQFHKWQRWRDIASTTPLGVLARPGDRIPARMSPAAAVFGRAR
IPGRASQLLGRAAAPAWCFVNVPMVEQSSSAIRSKGGWV

Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)

COG id: COG1057

COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nadD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NADD_ROSDO (Q16AV3)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_681576.1
- ProteinModelPortal:   Q16AV3
- SMR:   Q16AV3
- STRING:   Q16AV3
- GeneID:   4197450
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_1243
- NMPDR:   fig|375451.6.peg.1160
- eggNOG:   COG1057
- HOGENOM:   HBG739448
- OMA:   WVYLTGL
- PhylomeDB:   Q16AV3
- ProtClustDB:   PRK00071
- BioCyc:   RDEN375451:RD1_1243-MONOMER
- HAMAP:   MF_00244
- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR005248
- InterPro:   IPR014729
- Gene3D:   G3DSA:3.40.50.620
- PANTHER:   PTHR12039
- TIGRFAMs:   TIGR00125
- TIGRFAMs:   TIGR00482

Pfam domain/function: PF01467 CTP_transf_2

EC number: =2.7.7.18

Molecular weight: Translated: 21820; Mature: 21820

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQGFPKARAGEVIGLFGGSFDPAHQGHAHITREALKRFGLDRVWWLVSPGNPLKPQGPA
CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
PLDTRMARAKAIMQHPRVIITDVETRLGTRYTAATLDQLSALYPGVHFVWLMGADNLAQF
CHHHHHHHHHHHHHCCCEEEEECHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHH
HKWQRWRDIASTTPLGVLARPGDRIPARMSPAAAVFGRARIPGRASQLLGRAAAPAWCFV
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEEEE
NVPMVEQSSSAIRSKGGWV
ECCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MRQGFPKARAGEVIGLFGGSFDPAHQGHAHITREALKRFGLDRVWWLVSPGNPLKPQGPA
CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
PLDTRMARAKAIMQHPRVIITDVETRLGTRYTAATLDQLSALYPGVHFVWLMGADNLAQF
CHHHHHHHHHHHHHCCCEEEEECHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHH
HKWQRWRDIASTTPLGVLARPGDRIPARMSPAAAVFGRARIPGRASQLLGRAAAPAWCFV
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEEEE
NVPMVEQSSSAIRSKGGWV
ECCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA