| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678568
Identifier: 110678568
GI number: 110678568
Start: 1205398
End: 1205886
Strand: Direct
Name: 110678568
Synonym: RD1_1242
Alternate gene names: NA
Gene position: 1205398-1205886 (Clockwise)
Preceding gene: 110678567
Following gene: 110678569
Centisome position: 29.16
GC content: 67.48
Gene sequence:
>489_bases ATGGAAAGCCCGCTCAAGGCATTGATCGCGCGCCATGCGCAGCCCGGCGCGGTAACGTGGATCGGTCTGCGCCCCGCGCG CCGTGCGCCGCTTGTCGCCTGCGCGCGTGCCGAGGTTGGCGAAACCGGGCTGACGGGCGATCACGGAACCTCGCAAAAGC GCGCTGTGACCTTGCTTCAGGCGGAGCATCTGCCGGTGATCGGCGCGATGCTTGGGCGCACTCCGGTGACGCCCGAAGAG CTGCGGCGCAACCTTGTTGTATCGGGCATCAATCTTTCAGCGTTGAAGAACCGGCAGTTGCGGATCGGAGGCGTCGTGCT GGAAGTCACCGGGATTTGCGCCCCGTGCAGCCGGATGGAGGAGATCCTGGGCCCGGGCGGCTATTCAGCGGTGCGCGGGC ATGGCGGATGGTGTGCACGCGTGCTGCAGGGCGGCGAGATAAAGCGCGGCGACGCGGTCATGCCATTGACAAGCGGGGCC CCGGCCTGA
Upstream 100 bases:
>100_bases CGTCCGCTTGAGTTGGGCGAGGACGGGTTCTGGCAGTTGCATCCGAACTATCCGCTGGAGCGGTTGCCGGATTTGCGCGT GGAAGGGTCGGATCGTTAGG
Downstream 100 bases:
>100_bases TTGTAGGGCGCTGACCATCAGGCAAGGGAGCGATGGGTGCGACAAGGCTTTCCGAAAGCGCGCGCAGGTGAGGTGATCGG GCTGTTTGGCGGTTCGTTTG
Product: MOSC domain-containing protein
Products: NA
Alternate protein names: MOSC Domain Containing Protein; Mosc Domain Protein; MOSC Domain Protein; Alpha Amylase Domain-Containing Protein; Molybdopterin Cofactor Sulfurase Domain Containing Protein; Mosc Domain Containing Protein; Sulferase
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MESPLKALIARHAQPGAVTWIGLRPARRAPLVACARAEVGETGLTGDHGTSQKRAVTLLQAEHLPVIGAMLGRTPVTPEE LRRNLVVSGINLSALKNRQLRIGGVVLEVTGICAPCSRMEEILGPGGYSAVRGHGGWCARVLQGGEIKRGDAVMPLTSGA PA
Sequences:
>Translated_162_residues MESPLKALIARHAQPGAVTWIGLRPARRAPLVACARAEVGETGLTGDHGTSQKRAVTLLQAEHLPVIGAMLGRTPVTPEE LRRNLVVSGINLSALKNRQLRIGGVVLEVTGICAPCSRMEEILGPGGYSAVRGHGGWCARVLQGGEIKRGDAVMPLTSGA PA >Mature_162_residues MESPLKALIARHAQPGAVTWIGLRPARRAPLVACARAEVGETGLTGDHGTSQKRAVTLLQAEHLPVIGAMLGRTPVTPEE LRRNLVVSGINLSALKNRQLRIGGVVLEVTGICAPCSRMEEILGPGGYSAVRGHGGWCARVLQGGEIKRGDAVMPLTSGA PA
Specific function: Unknown
COG id: COG2258
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16923; Mature: 16923
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESPLKALIARHAQPGAVTWIGLRPARRAPLVACARAEVGETGLTGDHGTSQKRAVTLLQ CCCHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEHHCCCCCCCCCCCCCCCHHHEEEEHH AEHLPVIGAMLGRTPVTPEELRRNLVVSGINLSALKNRQLRIGGVVLEVTGICAPCSRME HCCCCHHHHHHCCCCCCHHHHHHHHEECCCCHHHHCCCEEEECEEEEEECCCCCCHHHHH EILGPGGYSAVRGHGGWCARVLQGGEIKRGDAVMPLTSGAPA HHHCCCCCCEECCCCHHHHHHHCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MESPLKALIARHAQPGAVTWIGLRPARRAPLVACARAEVGETGLTGDHGTSQKRAVTLLQ CCCHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEHHCCCCCCCCCCCCCCCHHHEEEEHH AEHLPVIGAMLGRTPVTPEELRRNLVVSGINLSALKNRQLRIGGVVLEVTGICAPCSRME HCCCCHHHHHHCCCCCCHHHHHHHHEECCCCHHHHCCCEEEECEEEEEECCCCCCHHHHH EILGPGGYSAVRGHGGWCARVLQGGEIKRGDAVMPLTSGAPA HHHCCCCCCEECCCCHHHHHHHCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA