| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678542
Identifier: 110678542
GI number: 110678542
Start: 1179003
End: 1180391
Strand: Reverse
Name: 110678542
Synonym: RD1_1214
Alternate gene names: NA
Gene position: 1180391-1179003 (Counterclockwise)
Preceding gene: 110678545
Following gene: 110678539
Centisome position: 28.56
GC content: 60.84
Gene sequence:
>1389_bases ATGACACTTCGCCGCCTGAGCCTTTGCCTTGCCCTATTGCCCCTGCCGCTTTTGGCGCAGGACGGCGAGACACAAACCAA ACAATACGAAGACGGTGGTGTCTATGAGGGGACATTCAAAGGCGGGGTGCAGCATGGCACGGGCACCTACAAACTGCCCA ATGGTTATGAATACACCGGCCAGTGGGTTGATGGGGAAATCAAGGGCGAGGGTATTGCCCGTTTCCCGAACGGGTCGGTT TACGAAGGGCTTTTCGCGAAAGGAAAACCCGAAGGCTTTGGCCGGATCACCTTTGCCGATGGCGGCACCTATGAGGGCGA ATGGCAAGGTGGCGCGATCATGGGGCGCGGCATCGCGCTTTATGCAAACGGCGTGCGCTATGAGGGCAGCTTTCGCAACG CCAAACATCACGGCAAGGGCACGATGCAAAGCCCCGGTGGATATGAGTATCAGGGCGACTGGGTGGATGGCGTCAAACAG GGCATGGGCACGATCACCTACCCGGATGGGGCCGTTTACGAGGGCAGCGTCGCCAATGGAAAGCGCGAAGGCGAAGGCAC GCTGACCATGCCGGACGGGCTGATCTACGTGGGCCTGTGGCGCGATGGGCAGATCGACGGCACCGGCAAGCTGACGCAGG CCAATGGCGATGTCTACGAGGGGCAACTGGTGGCAGGGCGTCGCGAGGGCACCGGCAAGGTGACATACGCCAATGGCGAT ACCTATGAAGGCGAATTCGCCAATGATCTGCGCGAGGGCCAGGGGACCTTCATCGCGCAGGACGGCTATAAATATGTCGG GTCATGGGTTGCCGGCGAAATCGAAGGCGAAGGTCGCGTGACCTATCCTGACGGCTCGGTCTATGTGGGGTCGTTGTCCG CAGGACAGGCGGATGGTCAGGGGCTGATCACCTACCCCGATGGCTCCACCTATGAGGGCGAGTGGAAGGACGGGGTGATC GACGGCGTAGGCAAGGCGGTATATGCAAATGGCGTCGTCTATGAGGGCGGTTTCCGAAATGCCCGCAACCACGGGCAAGG CGTGATGACCTATGCGGATGGGTATCGCTATGAGGGCGAATGGCTGGACGGGCAACGCCATGGCCAAGGCACCGCCACCT ATCCGGATGGGACCGTTTACACCGGCGGCTTTGCGGGTGGGCAGCGGGACGGGCAAGGCCGTATCGATATGCCTTCCGGT TTTTCCTATGTCGGGGCATGGGTCAGCGGCGAGATCGAAGGCATCGGTGTTGCGACCTACGCAAACGGCGATGTCTACGA AGGCATGTTCCGCGCCGGAAAACGGCAAGGGACCGGCACCATGCGCTATGCAACGGGCGAGGAAAACTCCGGCGAATGGG AAAACGGCATCCTGAAAGACGGCGGGTAG
Upstream 100 bases:
>100_bases CCCCGCCTATTGCGGCAAAAGGGCGTTGCCCCTGCCCGGCCCATTGCCTAAATTGCACCCCAACACCCCGCCGCAGTTTG CCAGAACATAAAGGGTAATC
Downstream 100 bases:
>100_bases AACATCGCGGTCAGATGGCCTCGCCCGCGTCGAGGCGCGCCAACAGCGCATCCGCCTGCGCAATCACCGTCTCGCGTCTT TCGGCATCCATCCGGTCCCA
Product: MORN repeat-containing protein
Products: NA
Alternate protein names: Morn Repeat Protein; Phosphatidylinositol-4-Phosphate 5-Kinase; MORN Repeat Protein; MORN Motif-Containing Protein; MORN Domain-Containing Protein; MORN Repeat Family Protein; Peptidase; Cytoplasmic Protein; Stage V Sporulation Protein K; PEGA Domain-Containing Protein; Phosphatidylinositol 4-Phosphate 5-Kinase; Signal Peptide; MorN Domain-Containing Protein; Morn Motif-Containing Protein; Morn Repeat-Containing Protein
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MTLRRLSLCLALLPLPLLAQDGETQTKQYEDGGVYEGTFKGGVQHGTGTYKLPNGYEYTGQWVDGEIKGEGIARFPNGSV YEGLFAKGKPEGFGRITFADGGTYEGEWQGGAIMGRGIALYANGVRYEGSFRNAKHHGKGTMQSPGGYEYQGDWVDGVKQ GMGTITYPDGAVYEGSVANGKREGEGTLTMPDGLIYVGLWRDGQIDGTGKLTQANGDVYEGQLVAGRREGTGKVTYANGD TYEGEFANDLREGQGTFIAQDGYKYVGSWVAGEIEGEGRVTYPDGSVYVGSLSAGQADGQGLITYPDGSTYEGEWKDGVI DGVGKAVYANGVVYEGGFRNARNHGQGVMTYADGYRYEGEWLDGQRHGQGTATYPDGTVYTGGFAGGQRDGQGRIDMPSG FSYVGAWVSGEIEGIGVATYANGDVYEGMFRAGKRQGTGTMRYATGEENSGEWENGILKDGG
Sequences:
>Translated_462_residues MTLRRLSLCLALLPLPLLAQDGETQTKQYEDGGVYEGTFKGGVQHGTGTYKLPNGYEYTGQWVDGEIKGEGIARFPNGSV YEGLFAKGKPEGFGRITFADGGTYEGEWQGGAIMGRGIALYANGVRYEGSFRNAKHHGKGTMQSPGGYEYQGDWVDGVKQ GMGTITYPDGAVYEGSVANGKREGEGTLTMPDGLIYVGLWRDGQIDGTGKLTQANGDVYEGQLVAGRREGTGKVTYANGD TYEGEFANDLREGQGTFIAQDGYKYVGSWVAGEIEGEGRVTYPDGSVYVGSLSAGQADGQGLITYPDGSTYEGEWKDGVI DGVGKAVYANGVVYEGGFRNARNHGQGVMTYADGYRYEGEWLDGQRHGQGTATYPDGTVYTGGFAGGQRDGQGRIDMPSG FSYVGAWVSGEIEGIGVATYANGDVYEGMFRAGKRQGTGTMRYATGEENSGEWENGILKDGG >Mature_461_residues TLRRLSLCLALLPLPLLAQDGETQTKQYEDGGVYEGTFKGGVQHGTGTYKLPNGYEYTGQWVDGEIKGEGIARFPNGSVY EGLFAKGKPEGFGRITFADGGTYEGEWQGGAIMGRGIALYANGVRYEGSFRNAKHHGKGTMQSPGGYEYQGDWVDGVKQG MGTITYPDGAVYEGSVANGKREGEGTLTMPDGLIYVGLWRDGQIDGTGKLTQANGDVYEGQLVAGRREGTGKVTYANGDT YEGEFANDLREGQGTFIAQDGYKYVGSWVAGEIEGEGRVTYPDGSVYVGSLSAGQADGQGLITYPDGSTYEGEWKDGVID GVGKAVYANGVVYEGGFRNARNHGQGVMTYADGYRYEGEWLDGQRHGQGTATYPDGTVYTGGFAGGQRDGQGRIDMPSGF SYVGAWVSGEIEGIGVATYANGDVYEGMFRAGKRQGTGTMRYATGEENSGEWENGILKDGG
Specific function: Unknown
COG id: COG4642
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI153792461, Length=252, Percent_Identity=34.5238095238095, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI157502187, Length=252, Percent_Identity=34.5238095238095, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI13376267, Length=171, Percent_Identity=38.5964912280702, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI40316935, Length=223, Percent_Identity=32.2869955156951, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI21704283, Length=347, Percent_Identity=29.971181556196, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI270265786, Length=188, Percent_Identity=33.5106382978723, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI18254456, Length=183, Percent_Identity=34.4262295081967, Blast_Score=90, Evalue=6e-18, Organism=Homo sapiens, GI299523224, Length=200, Percent_Identity=31.5, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI33359215, Length=200, Percent_Identity=31.5, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI149999376, Length=101, Percent_Identity=37.6237623762376, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI30520314, Length=101, Percent_Identity=37.6237623762376, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI21735575, Length=348, Percent_Identity=27.8735632183908, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI225690502, Length=142, Percent_Identity=35.9154929577465, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI225690500, Length=142, Percent_Identity=35.9154929577465, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI21704281, Length=171, Percent_Identity=34.5029239766082, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI21358361, Length=169, Percent_Identity=32.5443786982249, Blast_Score=85, Evalue=9e-17, Organism=Drosophila melanogaster, GI24654677, Length=168, Percent_Identity=34.5238095238095, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI19921216, Length=102, Percent_Identity=39.2156862745098, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24762835, Length=184, Percent_Identity=33.1521739130435, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24583069, Length=360, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24583071, Length=360, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356481, Length=104, Percent_Identity=39.4230769230769, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49210; Mature: 49079
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRRLSLCLALLPLPLLAQDGETQTKQYEDGGVYEGTFKGGVQHGTGTYKLPNGYEYTG CCHHHHHHHHHHHCCCEEECCCCCCCEECCCCCEEEEEECCCCCCCCCCEECCCCCEECC QWVDGEIKGEGIARFPNGSVYEGLFAKGKPEGFGRITFADGGTYEGEWQGGAIMGRGIAL EEECCEECCCCEEECCCCCEECCHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCEEE YANGVRYEGSFRNAKHHGKGTMQSPGGYEYQGDWVDGVKQGMGTITYPDGAVYEGSVANG EECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCEEECCCCCC KREGEGTLTMPDGLIYVGLWRDGQIDGTGKLTQANGDVYEGQLVAGRREGTGKVTYANGD CCCCCEEEECCCCEEEEEEECCCEECCCCEEEECCCCEEECEEEECCCCCCCEEEECCCC TYEGEFANDLREGQGTFIAQDGYKYVGSWVAGEIEGEGRVTYPDGSVYVGSLSAGQADGQ CCCCHHHHHHHCCCCCEEEECCCEEECCEEEEEECCCCEEECCCCCEEEEECCCCCCCCC GLITYPDGSTYEGEWKDGVIDGVGKAVYANGVVYEGGFRNARNHGQGVMTYADGYRYEGE EEEECCCCCCCCCCCCCCHHHHCCCEEEECCEEEECCCCCCCCCCCEEEEECCCEEECCE WLDGQRHGQGTATYPDGTVYTGGFAGGQRDGQGRIDMPSGFSYVGAWVSGEIEGIGVATY ECCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCEECCCCCCEEEEEECCEEEEEEEEEE ANGDVYEGMFRAGKRQGTGTMRYATGEENSGEWENGILKDGG CCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEECCCC >Mature Secondary Structure TLRRLSLCLALLPLPLLAQDGETQTKQYEDGGVYEGTFKGGVQHGTGTYKLPNGYEYTG CHHHHHHHHHHHCCCEEECCCCCCCEECCCCCEEEEEECCCCCCCCCCEECCCCCEECC QWVDGEIKGEGIARFPNGSVYEGLFAKGKPEGFGRITFADGGTYEGEWQGGAIMGRGIAL EEECCEECCCCEEECCCCCEECCHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCEEE YANGVRYEGSFRNAKHHGKGTMQSPGGYEYQGDWVDGVKQGMGTITYPDGAVYEGSVANG EECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCEEECCCCCC KREGEGTLTMPDGLIYVGLWRDGQIDGTGKLTQANGDVYEGQLVAGRREGTGKVTYANGD CCCCCEEEECCCCEEEEEEECCCEECCCCEEEECCCCEEECEEEECCCCCCCEEEECCCC TYEGEFANDLREGQGTFIAQDGYKYVGSWVAGEIEGEGRVTYPDGSVYVGSLSAGQADGQ CCCCHHHHHHHCCCCCEEEECCCEEECCEEEEEECCCCEEECCCCCEEEEECCCCCCCCC GLITYPDGSTYEGEWKDGVIDGVGKAVYANGVVYEGGFRNARNHGQGVMTYADGYRYEGE EEEECCCCCCCCCCCCCCHHHHCCCEEEECCEEEECCCCCCCCCCCEEEEECCCEEECCE WLDGQRHGQGTATYPDGTVYTGGFAGGQRDGQGRIDMPSGFSYVGAWVSGEIEGIGVATY ECCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCEECCCCCCEEEEEECCEEEEEEEEEE ANGDVYEGMFRAGKRQGTGTMRYATGEENSGEWENGILKDGG CCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA