Click here to switch to the map view.

The map label for this gene is 110678545

Identifier: 110678545

GI number: 110678545

Start: 1183160

End: 1184089

Strand: Reverse

Name: 110678545

Synonym: RD1_1217

Alternate gene names: NA

Gene position: 1184089-1183160 (Counterclockwise)

Preceding gene: 110678546

Following gene: 110678542

Centisome position: 28.65

GC content: 60.11

Gene sequence:

>930_bases
ATGTCCAACACACCCAAGATTTCGCGCCGCACGGCACTCGCCAGCGCGGCTGCCTTGCCGCTCGCTGCCGTCACAGCCCG
AACAGGCTACGCCGCGCCCCCGATCACCGGCGCGCAGATGTCACCCTTCCAGCGGCTCAAGGTCGGCGGGTTTGACGTCA
CCACGCTCTTGGCTGGCACCGTGCCGCGCGATGATCCGCACAGTATTTTCGGCCTGAACGTAGACAAAGAGACCTTTGAC
AGCGTCTCTGCCGCTGCAAACCTGCCCACGGACAAGGCGCAGTTTTTCTTTACGCCGACGGTTGTAAATACCGGCAGCGA
ACTGGTCTTGTTTGACACCGGCCTCTCCGGCGTCGGCACCGTGGCAGCGCTGGAAGCGGCTGGCTACACCGCGGATCTGA
TCGACGTGGTTGTTTTGACCCACATGCACGGCGATCATATTGGCGGCATGACGCTTGAGGATGGCAGCCCAACCTTTGCC
AATGCGCGCTATGTGACCGGGCGCATCGAATATGACGCCTGGGCCGCACAAGACAATGACCGCTTCAAATCCAAGGTTGT
TCCCTTCGCCGAGAAGATGACCTTCCTCGAAGATGGTGGTACGGTTGCCTCAGGGCTGACAGCAATGGGCGCTTTCGGTC
ACACGCCCGGTCACATGAACTACATGATCGAAAGCGAGGGCACGCAGCTTTACCTCGGCGCGGATTTCGCCAACCACTAC
ATCTGGTCCCTCGGGCATCCAGACTGGGAGGTGAAATTCGACATGGATAAACCCGCCGCCGCCGCGATGCGTCGCAAAAT
CCTGGACATGCTTGCCGCGGATAAGGTTGCATTTGTGGGCTATCACATGCCCTGGCCCGGCGTCGGGTATGTCGAAACCA
GAGACAGCGGGTTCACCTATGTGCCGCACAGCTACCAGCTGATGCTCTGA

Upstream 100 bases:

>100_bases
CTTTCGCGCGAAATCGTGAAGGACCGCCAAGCCGAAAACCATGGCTCCCGCGACATTCTGCCCTATGTTGCCACGGGATA
ACAATCCTCGGAGAATCCTG

Downstream 100 bases:

>100_bases
GCCTAGTGCAGGGTGGCTGTTACAGCTGCCCTGCCTTTTGCAATTGCTCCCAACCATGGCGCAGATGCTCGGTGCGAAAC
GAATGCCCGCCCCTGAACAG

Product: metallo-beta-lactamase family protein, putative

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Twin-Arginine Translocation Pathway Signal; Zn-Dependent Hydrolase; Beta-Lactamase-Like Protein; Beta-Lactamase; Metallo-Beta-Lactamase; Metal Dependent Hydrolase; Hydrolase; Methyl Parathion Hydrolase; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Metallo-Hydrolase Protein; Glyoxalase II; Zn-Dependent Beta-Lactamase Domain Hydrolase; Beta-Lactamase/Hydrolase; Metal-Dependent Hydrolase; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Aldehyde Dehydrogenase; Metallo-Beta-Lactamase Family Methyl Parathion Hydrolase; Signal Peptide Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSNTPKISRRTALASAAALPLAAVTARTGYAAPPITGAQMSPFQRLKVGGFDVTTLLAGTVPRDDPHSIFGLNVDKETFD
SVSAAANLPTDKAQFFFTPTVVNTGSELVLFDTGLSGVGTVAALEAAGYTADLIDVVVLTHMHGDHIGGMTLEDGSPTFA
NARYVTGRIEYDAWAAQDNDRFKSKVVPFAEKMTFLEDGGTVASGLTAMGAFGHTPGHMNYMIESEGTQLYLGADFANHY
IWSLGHPDWEVKFDMDKPAAAAMRRKILDMLAADKVAFVGYHMPWPGVGYVETRDSGFTYVPHSYQLML

Sequences:

>Translated_309_residues
MSNTPKISRRTALASAAALPLAAVTARTGYAAPPITGAQMSPFQRLKVGGFDVTTLLAGTVPRDDPHSIFGLNVDKETFD
SVSAAANLPTDKAQFFFTPTVVNTGSELVLFDTGLSGVGTVAALEAAGYTADLIDVVVLTHMHGDHIGGMTLEDGSPTFA
NARYVTGRIEYDAWAAQDNDRFKSKVVPFAEKMTFLEDGGTVASGLTAMGAFGHTPGHMNYMIESEGTQLYLGADFANHY
IWSLGHPDWEVKFDMDKPAAAAMRRKILDMLAADKVAFVGYHMPWPGVGYVETRDSGFTYVPHSYQLML
>Mature_308_residues
SNTPKISRRTALASAAALPLAAVTARTGYAAPPITGAQMSPFQRLKVGGFDVTTLLAGTVPRDDPHSIFGLNVDKETFDS
VSAAANLPTDKAQFFFTPTVVNTGSELVLFDTGLSGVGTVAALEAAGYTADLIDVVVLTHMHGDHIGGMTLEDGSPTFAN
ARYVTGRIEYDAWAAQDNDRFKSKVVPFAEKMTFLEDGGTVASGLTAMGAFGHTPGHMNYMIESEGTQLYLGADFANHYI
WSLGHPDWEVKFDMDKPAAAAMRRKILDMLAADKVAFVGYHMPWPGVGYVETRDSGFTYVPHSYQLML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33213; Mature: 33082

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTPKISRRTALASAAALPLAAVTARTGYAAPPITGAQMSPFQRLKVGGFDVTTLLAGT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEECCCCCHHHHHCCC
VPRDDPHSIFGLNVDKETFDSVSAAANLPTDKAQFFFTPTVVNTGSELVLFDTGLSGVGT
CCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECEEECCCCEEEEEECCCCCCCH
VAALEAAGYTADLIDVVVLTHMHGDHIGGMTLEDGSPTFANARYVTGRIEYDAWAAQDND
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEEECEEECCCCH
RFKSKVVPFAEKMTFLEDGGTVASGLTAMGAFGHTPGHMNYMIESEGTQLYLGADFANHY
HHHHHCCCHHHHHEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCE
IWSLGHPDWEVKFDMDKPAAAAMRRKILDMLAADKVAFVGYHMPWPGVGYVETRDSGFTY
EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCEEE
VPHSYQLML
CCCCEEEEC
>Mature Secondary Structure 
SNTPKISRRTALASAAALPLAAVTARTGYAAPPITGAQMSPFQRLKVGGFDVTTLLAGT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEECCCCCHHHHHCCC
VPRDDPHSIFGLNVDKETFDSVSAAANLPTDKAQFFFTPTVVNTGSELVLFDTGLSGVGT
CCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECEEECCCCEEEEEECCCCCCCH
VAALEAAGYTADLIDVVVLTHMHGDHIGGMTLEDGSPTFANARYVTGRIEYDAWAAQDND
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEEECEEECCCCH
RFKSKVVPFAEKMTFLEDGGTVASGLTAMGAFGHTPGHMNYMIESEGTQLYLGADFANHY
HHHHHCCCHHHHHEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCE
IWSLGHPDWEVKFDMDKPAAAAMRRKILDMLAADKVAFVGYHMPWPGVGYVETRDSGFTY
EEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCEEE
VPHSYQLML
CCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA