Click here to switch to the map view.

The map label for this gene is 110678448

Identifier: 110678448

GI number: 110678448

Start: 1064553

End: 1066379

Strand: Reverse

Name: 110678448

Synonym: RD1_1113

Alternate gene names: NA

Gene position: 1066379-1064553 (Counterclockwise)

Preceding gene: 110678449

Following gene: 110678447

Centisome position: 25.8

GC content: 60.7

Gene sequence:

>1827_bases
ATGAACGAAGATGCCCTGACCTTTCTGTCGCGCCAGCACCCCTATGATGAGTTGCCCGCCGGTGTGCTCAACGATGTGGC
CGCACAGGTTGAGAAACTCAGCGTCGCTGAAGGCGAGATGATCTATGCTTACGGCGAACCGCTTGAGGGGCTCTACATCA
TCCAATCCGGGCTGGTCGATGTCCGGGATCAATCCGACACGCAGGTCTCCATGCTGGAGCGTGGAAACTCTTTTGGCGAA
CGGGGATTGCTGGCAGATGGCAATGCCGTCACATCGGCCCGCGCCGTCAGGGACACGCTTTTGATCCGCGTGCCCGTTTC
GCTTTTCAACACCCTGCGCACCGAACAATCCCCTTTTCAGCGCTTTTTTGCACGCAGCAGCGCACGCCCCGACAAGAGCG
CAACGCAGCAGACCAGCCTCGCGCAGGTCTCGGTCGATGCGCTGATGGTCCGTAATCCGGTGACCTGCACGCCGGGGACT
TCGGTGGTGGATGCGGCGGTTCTGATGACATCACGGCGCATTTCCTGCCTGTGCATCACCGAAGAGGACCGTCTGACCGG
GATCGTGACCCTGCGTGACCTTGTGGGCAAAGCGCTTGCGGCAGGTCTGCCCCCGCAAACGCCGCTCAGCGACATCATCC
AGAACGAACCCGTGTCACTGCCACCAACCGCCATCGGTTCGGACGTGCTGCATATGATGATGGAATACAACCTCGGCCAT
TTGCCGATTGTCGACGCGGGCAAGCTGGTCGGGATCGTCACGCAAACCGACCTCACCCGCTATCAGGCGACAACTGCCGC
GGGGCTCGTTGCTGATGCGGCACGCGCCCAAAGCGTCGAGGCGCTCGCGGATATCACGGGCCGCATTCCAGCACTGCTCG
TGCAACTGGTTGCGGCCGGAAACCGGCATGACGTCGTAACGCGCATGATCACGGACATCGCGGATGTGGTGACACGCAGA
TTGCTGAACATGGCAGAGGAAAAACTCGGCCCCGCACCGCTACGGTATCTGTGGCTTGCCTGCGGATCACAAGGGCGGCA
GGAACAGACAGGTGTGTCGGATCAGGACAATTGCCTGATCCTTGAGGATGGCGCATCGCGGGATGACATCGCCTATTTTC
ACGAGATGGCCACCTTTGTCAGCGATGGGTTGAACGCCTGCGGCTATGTCTATTGCCCCGGCGACATGATGGCCACGAAC
CCGCGCTGGTGCCAGCCGCTGTCGGTCTGGAAAGAGTATTTCAACGGCTGGATCAAGAGCCCGAGCAAGGAAGCACAGAT
GCTGGCCTCCGTGATGTTCGACCTGCGCCCCATCGGCGGCGACGCATCGCTCTTTCACGGTATGCAACAGGCCACGCTGG
AAAAAGCCGCCAAGAACTCGATCTTCACCGCGCATATGGCCAGCAATTCACTGACCCATCAGACACCTCTGGGGCTGCTG
CGCGGTCTTGCCACCATCAGCTCCGGCGATCACCGCAAGACCATCGACACCAAGCTGAACGGGGTCGTACCCGTGGTTGA
TCTGGGGCGCATGTATGCCCTGCAAGGCAAGCTCACCGTCGCCAACACGCGCGCCCGGTTGATTGCCGCGCTCAACAACA
AGACGATCAGCGCCAAGGGCGGGCGCGACCTGCTGGAGGCCTATGATCTGGTTGCACAGACGCGGCTTGAACATCAGGCG
CGGCTGATCAAGGAGGGCAAGGCACCCGACAACTACCTGCCCCCGGCCCGCCTGTCGGATTTCGAACGCAGTCACCTGCG
GGATGCTTTTGTCGTGATCAAAACAATGCAGTCGGCTCTGATGCAAGGACGTGGCATCTTGGGCTGA

Upstream 100 bases:

>100_bases
TCACTAAGCCTTGCGGTTGGCCGGGAAATCCCCGGCCAGTCCACAAAACACACCTGCCCCGCATGACGTGGGGCAGGTGC
CTTTCTTCAAGGATGTTTCG

Downstream 100 bases:

>100_bases
TATCTACGGCAATTCTCGGGGAGGAGAAGGCTCATGTTTTTCGAATTGATCGGCACGATTATCGCAGGCGTTGCCATGGC
GCTGCTTGTCTGGGCCGTGA

Product: nucleotidyltransferase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MNEDALTFLSRQHPYDELPAGVLNDVAAQVEKLSVAEGEMIYAYGEPLEGLYIIQSGLVDVRDQSDTQVSMLERGNSFGE
RGLLADGNAVTSARAVRDTLLIRVPVSLFNTLRTEQSPFQRFFARSSARPDKSATQQTSLAQVSVDALMVRNPVTCTPGT
SVVDAAVLMTSRRISCLCITEEDRLTGIVTLRDLVGKALAAGLPPQTPLSDIIQNEPVSLPPTAIGSDVLHMMMEYNLGH
LPIVDAGKLVGIVTQTDLTRYQATTAAGLVADAARAQSVEALADITGRIPALLVQLVAAGNRHDVVTRMITDIADVVTRR
LLNMAEEKLGPAPLRYLWLACGSQGRQEQTGVSDQDNCLILEDGASRDDIAYFHEMATFVSDGLNACGYVYCPGDMMATN
PRWCQPLSVWKEYFNGWIKSPSKEAQMLASVMFDLRPIGGDASLFHGMQQATLEKAAKNSIFTAHMASNSLTHQTPLGLL
RGLATISSGDHRKTIDTKLNGVVPVVDLGRMYALQGKLTVANTRARLIAALNNKTISAKGGRDLLEAYDLVAQTRLEHQA
RLIKEGKAPDNYLPPARLSDFERSHLRDAFVVIKTMQSALMQGRGILG

Sequences:

>Translated_608_residues
MNEDALTFLSRQHPYDELPAGVLNDVAAQVEKLSVAEGEMIYAYGEPLEGLYIIQSGLVDVRDQSDTQVSMLERGNSFGE
RGLLADGNAVTSARAVRDTLLIRVPVSLFNTLRTEQSPFQRFFARSSARPDKSATQQTSLAQVSVDALMVRNPVTCTPGT
SVVDAAVLMTSRRISCLCITEEDRLTGIVTLRDLVGKALAAGLPPQTPLSDIIQNEPVSLPPTAIGSDVLHMMMEYNLGH
LPIVDAGKLVGIVTQTDLTRYQATTAAGLVADAARAQSVEALADITGRIPALLVQLVAAGNRHDVVTRMITDIADVVTRR
LLNMAEEKLGPAPLRYLWLACGSQGRQEQTGVSDQDNCLILEDGASRDDIAYFHEMATFVSDGLNACGYVYCPGDMMATN
PRWCQPLSVWKEYFNGWIKSPSKEAQMLASVMFDLRPIGGDASLFHGMQQATLEKAAKNSIFTAHMASNSLTHQTPLGLL
RGLATISSGDHRKTIDTKLNGVVPVVDLGRMYALQGKLTVANTRARLIAALNNKTISAKGGRDLLEAYDLVAQTRLEHQA
RLIKEGKAPDNYLPPARLSDFERSHLRDAFVVIKTMQSALMQGRGILG
>Mature_608_residues
MNEDALTFLSRQHPYDELPAGVLNDVAAQVEKLSVAEGEMIYAYGEPLEGLYIIQSGLVDVRDQSDTQVSMLERGNSFGE
RGLLADGNAVTSARAVRDTLLIRVPVSLFNTLRTEQSPFQRFFARSSARPDKSATQQTSLAQVSVDALMVRNPVTCTPGT
SVVDAAVLMTSRRISCLCITEEDRLTGIVTLRDLVGKALAAGLPPQTPLSDIIQNEPVSLPPTAIGSDVLHMMMEYNLGH
LPIVDAGKLVGIVTQTDLTRYQATTAAGLVADAARAQSVEALADITGRIPALLVQLVAAGNRHDVVTRMITDIADVVTRR
LLNMAEEKLGPAPLRYLWLACGSQGRQEQTGVSDQDNCLILEDGASRDDIAYFHEMATFVSDGLNACGYVYCPGDMMATN
PRWCQPLSVWKEYFNGWIKSPSKEAQMLASVMFDLRPIGGDASLFHGMQQATLEKAAKNSIFTAHMASNSLTHQTPLGLL
RGLATISSGDHRKTIDTKLNGVVPVVDLGRMYALQGKLTVANTRARLIAALNNKTISAKGGRDLLEAYDLVAQTRLEHQA
RLIKEGKAPDNYLPPARLSDFERSHLRDAFVVIKTMQSALMQGRGILG

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 65989; Mature: 65989

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDALTFLSRQHPYDELPAGVLNDVAAQVEKLSVAEGEMIYAYGEPLEGLYIIQSGLVD
CCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCEE
VRDQSDTQVSMLERGNSFGERGLLADGNAVTSARAVRDTLLIRVPVSLFNTLRTEQSPFQ
CCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECHHHHHHHHCCHHHHH
RFFARSSARPDKSATQQTSLAQVSVDALMVRNPVTCTPGTSVVDAAVLMTSRRISCLCIT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEC
EEDRLTGIVTLRDLVGKALAAGLPPQTPLSDIIQNEPVSLPPTAIGSDVLHMMMEYNLGH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
LPIVDAGKLVGIVTQTDLTRYQATTAAGLVADAARAQSVEALADITGRIPALLVQLVAAG
CCEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
NRHDVVTRMITDIADVVTRRLLNMAEEKLGPAPLRYLWLACGSQGRQEQTGVSDQDNCLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCCCCCEEE
LEDGASRDDIAYFHEMATFVSDGLNACGYVYCPGDMMATNPRWCQPLSVWKEYFNGWIKS
EECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
PSKEAQMLASVMFDLRPIGGDASLFHGMQQATLEKAAKNSIFTAHMASNSLTHQTPLGLL
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHH
RGLATISSGDHRKTIDTKLNGVVPVVDLGRMYALQGKLTVANTRARLIAALNNKTISAKG
HHHHHHCCCCCCCCHHHHHCCCCCHHHHCCEEEECCCEEEECHHHHHHHHHCCCEEECCC
GRDLLEAYDLVAQTRLEHQARLIKEGKAPDNYLPPARLSDFERSHLRDAFVVIKTMQSAL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MQGRGILG
HCCCCCCC
>Mature Secondary Structure
MNEDALTFLSRQHPYDELPAGVLNDVAAQVEKLSVAEGEMIYAYGEPLEGLYIIQSGLVD
CCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCEE
VRDQSDTQVSMLERGNSFGERGLLADGNAVTSARAVRDTLLIRVPVSLFNTLRTEQSPFQ
CCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECHHHHHHHHCCHHHHH
RFFARSSARPDKSATQQTSLAQVSVDALMVRNPVTCTPGTSVVDAAVLMTSRRISCLCIT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEC
EEDRLTGIVTLRDLVGKALAAGLPPQTPLSDIIQNEPVSLPPTAIGSDVLHMMMEYNLGH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
LPIVDAGKLVGIVTQTDLTRYQATTAAGLVADAARAQSVEALADITGRIPALLVQLVAAG
CCEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
NRHDVVTRMITDIADVVTRRLLNMAEEKLGPAPLRYLWLACGSQGRQEQTGVSDQDNCLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCCCCCEEE
LEDGASRDDIAYFHEMATFVSDGLNACGYVYCPGDMMATNPRWCQPLSVWKEYFNGWIKS
EECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
PSKEAQMLASVMFDLRPIGGDASLFHGMQQATLEKAAKNSIFTAHMASNSLTHQTPLGLL
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHH
RGLATISSGDHRKTIDTKLNGVVPVVDLGRMYALQGKLTVANTRARLIAALNNKTISAKG
HHHHHHCCCCCCCCHHHHHCCCCCHHHHCCEEEECCCEEEECHHHHHHHHHCCCEEECCC
GRDLLEAYDLVAQTRLEHQARLIKEGKAPDNYLPPARLSDFERSHLRDAFVVIKTMQSAL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MQGRGILG
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]