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The map label for this gene is 110678447

Identifier: 110678447

GI number: 110678447

Start: 1063995

End: 1064519

Strand: Reverse

Name: 110678447

Synonym: RD1_1112

Alternate gene names: NA

Gene position: 1064519-1063995 (Counterclockwise)

Preceding gene: 110678448

Following gene: 110678446

Centisome position: 25.76

GC content: 60.95

Gene sequence:

>525_bases
ATGTTTTTCGAATTGATCGGCACGATTATCGCAGGCGTTGCCATGGCGCTGCTTGTCTGGGCCGTGAACCGGACCCTGCT
CAAGGGGCGTTTGCCAAGCTGGCTGGTACCGGTGTCCGCAGGTCTGGCCATGCTGGTGGCGACGATCTCCAGCGAATACG
GCTGGTTTGCCCGCACGCAGGCCAATATGCCCGGAGGTTTCGTCGTCGCGCAAAGCGTGGAAGAACAGGTTTTCTACCGG
CCATGGACCTATGCGGTGCCCTATGTCAGCCGCTTTGTGGCCGTGGATCAGGCGACCATGCGCACACACGCAGAACAACC
CGGCCAGCGCATCGTCGATCTGGTGTTCTATGGCCGATGGGCGCGCACGGCCAAGGTGCCTGTGCTGTTTGACTGCACGC
AAAGTCGGCGCGCTGACATCATTGACGGCGTGGAATTTGGCGACAACGGTGAAGCACTGGGCGTTGACTGGATCGCCGTC
AGTGCCAGCGATCCAATCCTGAGGGTCGCCTGCGAGGAGGTGTGA

Upstream 100 bases:

>100_bases
GGATGCTTTTGTCGTGATCAAAACAATGCAGTCGGCTCTGATGCAAGGACGTGGCATCTTGGGCTGATATCTACGGCAAT
TCTCGGGGAGGAGAAGGCTC

Downstream 100 bases:

>100_bases
GATGAAAAACCTCAGCCTCCGGCTCCGGGTCTTTCTGTTCTTTTGCCTGACGGCCTTTGGCAGTATCGCGATCTGCCTTG
GCGCGCTTTACATGGGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MFFELIGTIIAGVAMALLVWAVNRTLLKGRLPSWLVPVSAGLAMLVATISSEYGWFARTQANMPGGFVVAQSVEEQVFYR
PWTYAVPYVSRFVAVDQATMRTHAEQPGQRIVDLVFYGRWARTAKVPVLFDCTQSRRADIIDGVEFGDNGEALGVDWIAV
SASDPILRVACEEV

Sequences:

>Translated_174_residues
MFFELIGTIIAGVAMALLVWAVNRTLLKGRLPSWLVPVSAGLAMLVATISSEYGWFARTQANMPGGFVVAQSVEEQVFYR
PWTYAVPYVSRFVAVDQATMRTHAEQPGQRIVDLVFYGRWARTAKVPVLFDCTQSRRADIIDGVEFGDNGEALGVDWIAV
SASDPILRVACEEV
>Mature_174_residues
MFFELIGTIIAGVAMALLVWAVNRTLLKGRLPSWLVPVSAGLAMLVATISSEYGWFARTQANMPGGFVVAQSVEEQVFYR
PWTYAVPYVSRFVAVDQATMRTHAEQPGQRIVDLVFYGRWARTAKVPVLFDCTQSRRADIIDGVEFGDNGEALGVDWIAV
SASDPILRVACEEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19202; Mature: 19202

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFELIGTIIAGVAMALLVWAVNRTLLKGRLPSWLVPVSAGLAMLVATISSEYGWFARTQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
ANMPGGFVVAQSVEEQVFYRPWTYAVPYVSRFVAVDQATMRTHAEQPGQRIVDLVFYGRW
CCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
ARTAKVPVLFDCTQSRRADIIDGVEFGDNGEALGVDWIAVSASDPILRVACEEV
CCCCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEEEEEEECCCCEEEHEECCC
>Mature Secondary Structure
MFFELIGTIIAGVAMALLVWAVNRTLLKGRLPSWLVPVSAGLAMLVATISSEYGWFARTQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
ANMPGGFVVAQSVEEQVFYRPWTYAVPYVSRFVAVDQATMRTHAEQPGQRIVDLVFYGRW
CCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
ARTAKVPVLFDCTQSRRADIIDGVEFGDNGEALGVDWIAVSASDPILRVACEEV
CCCCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEEEEEEECCCCEEEHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA