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The map label for this gene is rpsU [H]

Identifier: 110678379

GI number: 110678379

Start: 1002646

End: 1002765

Strand: Reverse

Name: rpsU [H]

Synonym: RD1_1036

Alternate gene names: 110678379

Gene position: 1002765-1002646 (Counterclockwise)

Preceding gene: 110678384

Following gene: 110678376

Centisome position: 24.26

GC content: 53.33

Gene sequence:

>120_bases
ATGAAGCTCAAGCAACATTTCGAAAAGCCGTCCGAGAAAAAAGCGCGCGAGAAAGCTGAAGCGATCCGCCGTGCCCGCAA
GCTGGCACGCAAAAAGGCACAACGCGAAGGGATGATGTAA

Upstream 100 bases:

>100_bases
TGGTGAAAACCACATGCAGGTTAGTGTTCGCGACAACAATGTCGATCAGGCCCTCCGGGCTCTGAAGAAAAAGCTGCAGC
GCGAAGGCGTCTTCCGCGAA

Downstream 100 bases:

>100_bases
GTCACCTTCGTTTTGTACTTTTGAATCAGCGAACCCCCGTGTGGACCTCCACGCGGGGGTTTTGTTTGGAAGGGTGCTAG
AGCGTCTGACGAAAAATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 39; Mature: 39

Protein sequence:

>39_residues
MKLKQHFEKPSEKKAREKAEAIRRARKLARKKAQREGMM

Sequences:

>Translated_39_residues
MKLKQHFEKPSEKKAREKAEAIRRARKLARKKAQREGMM
>Mature_39_residues
MKLKQHFEKPSEKKAREKAEAIRRARKLARKKAQREGMM

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001911
- InterPro:   IPR018278
- ProDom:   PD005521 [H]

Pfam domain/function: PF01165 Ribosomal_S21 [H]

EC number: NA

Molecular weight: Translated: 4696; Mature: 4696

Theoretical pI: Translated: 11.75; Mature: 11.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKQHFEKPSEKKAREKAEAIRRARKLARKKAQREGMM
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLKQHFEKPSEKKAREKAEAIRRARKLARKKAQREGMM
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA