Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is eamB [H]

Identifier: 110678343

GI number: 110678343

Start: 962539

End: 963135

Strand: Reverse

Name: eamB [H]

Synonym: RD1_0999

Alternate gene names: 110678343

Gene position: 963135-962539 (Counterclockwise)

Preceding gene: 110678345

Following gene: 110678342

Centisome position: 23.3

GC content: 61.47

Gene sequence:

>597_bases
ATGCCTTATGAAACACTCTCCGCCCTCGTGGTTTTCGCCTTTGTCAGTTCGGTAACGCCCGGGCCAAATAACCTGATGCT
GATGGCCTCTGGTGCCAACTTCGGTTTTTCCCGGTCCGTGCCGCATATGCTGGGTATCGCCATCGGCTTTACGCTGATGA
TCGTCGCCGTGGGTGCCGGGCTGATCAGGCTTTTTGACGCCTGGCCGCCCAGCTATACGGTGCTGAAAGTCTGCTCCGTC
GCCTATATGACATGGCTGGCATGGAAAATCGCGCGCGCAGGCCCGGCCAAATCGGGCGAGGCGCAGGGCAGGCCGATGAC
ATTCCTGCAGGCCGCCGCCTTTCAGTGGGTCAACCCAAAGGCATGGGCCATGGCCCTGACCGCCCTGTCGGTCTATGCAA
CGGATGCCACGCTGGTTGCGTTCAGCCTTGTGGCCTTGGTGTTCGGACTGGTGAACCTGCCGTCGATCACGCTCTGGGCG
GTTCTGGGCCAGCAAATGGCGCGCATCCTGACGAACCCGCTGCGCTTGCGCGTTTTCAACTGCACCATGGCCGCCCTGCT
GATGGCCTCTCTCATTCCGATGCTCTGGCCCGCGTGA

Upstream 100 bases:

>100_bases
GTTCGGTTTTCTGGTCAAGGCTGGTCATTAATTGTGATTATTCCGCAAAATCCGAAAATTTTGCAATCCACATATATTTC
GAATGCGCCATTCTTTGCGC

Downstream 100 bases:

>100_bases
TCCCGTTGCAAAGCCCCGCAATGCCCGCCATATAGGACCCGTTCAATCGGAGTGGCTCATGACGCAATATATGGATTTCG
AAAAACCTCTTGCCGAGATT

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MPYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAGLIRLFDAWPPSYTVLKVCSV
AYMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPKAWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWA
VLGQQMARILTNPLRLRVFNCTMAALLMASLIPMLWPA

Sequences:

>Translated_198_residues
MPYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAGLIRLFDAWPPSYTVLKVCSV
AYMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPKAWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWA
VLGQQMARILTNPLRLRVFNCTMAALLMASLIPMLWPA
>Mature_197_residues
PYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAGLIRLFDAWPPSYTVLKVCSVA
YMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPKAWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWAV
LGQQMARILTNPLRLRVFNCTMAALLMASLIPMLWPA

Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788932, Length=188, Percent_Identity=30.3191489361702, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21286; Mature: 21155

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAG
CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LIRLFDAWPPSYTVLKVCSVAYMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHH
AWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWAVLGQQMARILTNPLRLRVFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHEEHHH
CTMAALLMASLIPMLWPA
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PYETLSALVVFAFVSSVTPGPNNLMLMASGANFGFSRSVPHMLGIAIGFTLMIVAVGAG
CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LIRLFDAWPPSYTVLKVCSVAYMTWLAWKIARAGPAKSGEAQGRPMTFLQAAAFQWVNPK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHH
AWAMALTALSVYATDATLVAFSLVALVFGLVNLPSITLWAVLGQQMARILTNPLRLRVFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHEEHHH
CTMAALLMASLIPMLWPA
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA