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The map label for this gene is cycB [H]

Identifier: 110678238

GI number: 110678238

Start: 867614

End: 868123

Strand: Direct

Name: cycB [H]

Synonym: RD1_0891

Alternate gene names: 110678238

Gene position: 867614-868123 (Clockwise)

Preceding gene: 110678237

Following gene: 110678239

Centisome position: 20.99

GC content: 55.49

Gene sequence:

>510_bases
ATGAAAACCACACACCGTATTTTTGCACTCTGCCTTGCCGCAGGTCTGCCAATGACCGCCCTGGCTGAGGAGCCAGTGGA
TCCGGCACTTTACGAAGCGGCCTACAGTGAGGATGGCCGCTACTTCAACGCTGATGATATCCCGACCTACAATATCACCG
AGGATGGCACAGTCGACTGGCTGACGTTTTCGGGCTTTCGCCGCTACCACGCGGAATGCCACGTCTGTCATGGCCCGGAT
GGCGAAGGATCGACCTATGCGCCCGCTGTCAAGAATGCAGCCGTGACCCTCGGATATGAAGGGTTTTTCGATGTGGTCGT
GAATGGTCGCCAGAACGGAAATTCGGTAATGCCGCATTTCGGGGAAAACCGGAATGTCATGTGTTATCTGGACGACATAT
ATGTCTATCTGAAGGCACGTGGAACCGACGCGCTGCCGCGCGGACGTCCGGCCAAGAAAGAAGCCAAATCGGATGCTATT
CGTGAGGACGAAAATGCCTGCATGGGCTGA

Upstream 100 bases:

>100_bases
TTGATCCAGCATGAACGAATGGCGCGGCCGAACGGTCGCGCCACTTCAAAAACAAACGGGCGACAGTCAGTGGCTGGCCC
AGTGATCACGGGTAAATCTT

Downstream 100 bases:

>100_bases
AAAATACCAGCGCCTGGTTGTGACCCTTCTCCTTGGGTTCTGCCTTGCGGGGTCTGCAGGCGCACAAACGTCTGATTTGG
TTTCAAGCAAAGCCTTACGC

Product: cytochrome c553I

Products: NA

Alternate protein names: Cytochrome c553I [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKTTHRIFALCLAAGLPMTALAEEPVDPALYEAAYSEDGRYFNADDIPTYNITEDGTVDWLTFSGFRRYHAECHVCHGPD
GEGSTYAPAVKNAAVTLGYEGFFDVVVNGRQNGNSVMPHFGENRNVMCYLDDIYVYLKARGTDALPRGRPAKKEAKSDAI
REDENACMG

Sequences:

>Translated_169_residues
MKTTHRIFALCLAAGLPMTALAEEPVDPALYEAAYSEDGRYFNADDIPTYNITEDGTVDWLTFSGFRRYHAECHVCHGPD
GEGSTYAPAVKNAAVTLGYEGFFDVVVNGRQNGNSVMPHFGENRNVMCYLDDIYVYLKARGTDALPRGRPAKKEAKSDAI
REDENACMG
>Mature_169_residues
MKTTHRIFALCLAAGLPMTALAEEPVDPALYEAAYSEDGRYFNADDIPTYNITEDGTVDWLTFSGFRRYHAECHVCHGPD
GEGSTYAPAVKNAAVTLGYEGFFDVVVNGRQNGNSVMPHFGENRNVMCYLDDIYVYLKARGTDALPRGRPAKKEAKSDAI
REDENACMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022411
- InterPro:   IPR009056 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18641; Mature: 18641

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTHRIFALCLAAGLPMTALAEEPVDPALYEAAYSEDGRYFNADDIPTYNITEDGTVDW
CCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCEECCCCCCEECCCCCCCEEE
LTFSGFRRYHAECHVCHGPDGEGSTYAPAVKNAAVTLGYEGFFDVVVNGRQNGNSVMPHF
EECCCHHHCCCEEEEEECCCCCCCEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCC
GENRNVMCYLDDIYVYLKARGTDALPRGRPAKKEAKSDAIREDENACMG
CCCCCEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKTTHRIFALCLAAGLPMTALAEEPVDPALYEAAYSEDGRYFNADDIPTYNITEDGTVDW
CCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCEECCCCCCEECCCCCCCEEE
LTFSGFRRYHAECHVCHGPDGEGSTYAPAVKNAAVTLGYEGFFDVVVNGRQNGNSVMPHF
EECCCHHHCCCEEEEEECCCCCCCEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCC
GENRNVMCYLDDIYVYLKARGTDALPRGRPAKKEAKSDAIREDENACMG
CCCCCEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1657873 [H]