Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is moxJ [H]

Identifier: 110678239

GI number: 110678239

Start: 868107

End: 868952

Strand: Direct

Name: moxJ [H]

Synonym: RD1_0892

Alternate gene names: 110678239

Gene position: 868107-868952 (Clockwise)

Preceding gene: 110678238

Following gene: 110678240

Centisome position: 21.0

GC content: 55.91

Gene sequence:

>846_bases
ATGCCTGCATGGGCTGAAAAATACCAGCGCCTGGTTGTGACCCTTCTCCTTGGGTTCTGCCTTGCGGGGTCTGCAGGCGC
ACAAACGTCTGATTTGGTTTCAAGCAAAGCCTTACGCGTTTGTGCGGACCCCGCAAACTACCCGATGTCTACCCGTGATG
AAGACGGCTATGAAAACAAGCTGGCTGAACTTGTCGGCGCCAAGCTCGAACTTCCCGTGCAGTATACCTGGTTTCCGATG
GCAACCGGGTTTGTGCGCAACACATTGAACGCCAAACGCTGCGATCTGATCATCGGCTATGCGCAGGGCCATGAGCTGGT
GTTGAACACCAACCACTATTTCACCTCCGTATATACCATCATCGTGCCACAGGACAGCGATCTGGCTGATGTGAAATCGC
TTGCTGATCCAGCCCTCAAAGGGCGTAAACTGGGCATTATCGCAGGCACACCGCCGTCGGCGCATCTTGCGCGGCACGGG
CTGATTGCAAAGGCGAAAGCTTACAATCTCGTGGTGGACCGACGTGTCGAGAACCCGGCGATTGACATGCTTGACGACCT
CAGCGCAGGCGAAATTGACGCCGCCGTTTTGTGGGGCCCATTGGGCGGGCCGCTGGTCAAATCCAGCTATCCCGGTTTCA
AAGTGATCCCGCTGATCAGCGAGCAATCACCGCCGCGTCTTTTCTTTCGGATCACGATGGGCGTTCGTCTGGGCGAAAAG
GTCTGGCAGCGTAACCTCAATTCGCTGATCCGCCGCAATCAGGACGAAATCAACAGCTTGCTCGTGGATGCTGGTGTGCC
GCTTGTGACCGATCTTGGCACTGAGGTGTTGGAGATCTCGAATTGA

Upstream 100 bases:

>100_bases
GACATATATGTCTATCTGAAGGCACGTGGAACCGACGCGCTGCCGCGCGGACGTCCGGCCAAGAAAGAAGCCAAATCGGA
TGCTATTCGTGAGGACGAAA

Downstream 100 bases:

>100_bases
TCAAAATCCTGCTGGCAGCGGCATTTCTCACGGTGGCGCAGCACGCAGGGGCACAAACCGTGCCCGAGCCTTCAGATTAC
CGAATGGATCACTACCGCAG

Product: putative methanol oxidation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MPAWAEKYQRLVVTLLLGFCLAGSAGAQTSDLVSSKALRVCADPANYPMSTRDEDGYENKLAELVGAKLELPVQYTWFPM
ATGFVRNTLNAKRCDLIIGYAQGHELVLNTNHYFTSVYTIIVPQDSDLADVKSLADPALKGRKLGIIAGTPPSAHLARHG
LIAKAKAYNLVVDRRVENPAIDMLDDLSAGEIDAAVLWGPLGGPLVKSSYPGFKVIPLISEQSPPRLFFRITMGVRLGEK
VWQRNLNSLIRRNQDEINSLLVDAGVPLVTDLGTEVLEISN

Sequences:

>Translated_281_residues
MPAWAEKYQRLVVTLLLGFCLAGSAGAQTSDLVSSKALRVCADPANYPMSTRDEDGYENKLAELVGAKLELPVQYTWFPM
ATGFVRNTLNAKRCDLIIGYAQGHELVLNTNHYFTSVYTIIVPQDSDLADVKSLADPALKGRKLGIIAGTPPSAHLARHG
LIAKAKAYNLVVDRRVENPAIDMLDDLSAGEIDAAVLWGPLGGPLVKSSYPGFKVIPLISEQSPPRLFFRITMGVRLGEK
VWQRNLNSLIRRNQDEINSLLVDAGVPLVTDLGTEVLEISN
>Mature_280_residues
PAWAEKYQRLVVTLLLGFCLAGSAGAQTSDLVSSKALRVCADPANYPMSTRDEDGYENKLAELVGAKLELPVQYTWFPMA
TGFVRNTLNAKRCDLIIGYAQGHELVLNTNHYFTSVYTIIVPQDSDLADVKSLADPALKGRKLGIIAGTPPSAHLARHGL
IAKAKAYNLVVDRRVENPAIDMLDDLSAGEIDAAVLWGPLGGPLVKSSYPGFKVIPLISEQSPPRLFFRITMGVRLGEKV
WQRNLNSLIRRNQDEINSLLVDAGVPLVTDLGTEVLEISN

Specific function: May be involved in the assemblage of active methanol dehydrogenase and/or its cofactor PQQ in the periplasm [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022455
- InterPro:   IPR001638
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30656; Mature: 30524

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAWAEKYQRLVVTLLLGFCLAGSAGAQTSDLVSSKALRVCADPANYPMSTRDEDGYENK
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHH
LAELVGAKLELPVQYTWFPMATGFVRNTLNAKRCDLIIGYAQGHELVLNTNHYFTSVYTI
HHHHHCCCEECCEEEEEEHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCEEEEEEEE
IVPQDSDLADVKSLADPALKGRKLGIIAGTPPSAHLARHGLIAKAKAYNLVVDRRVENPA
EEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHHHEEEEECCCCCCH
IDMLDDLSAGEIDAAVLWGPLGGPLVKSSYPGFKVIPLISEQSPPRLFFRITMGVRLGEK
HHHHHCCCCCCCCEEEEECCCCCCHHCCCCCCEEEEEEECCCCCCEEEEEEEECCHHHHH
VWQRNLNSLIRRNQDEINSLLVDAGVPLVTDLGTEVLEISN
HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHCCCCCEEECC
>Mature Secondary Structure 
PAWAEKYQRLVVTLLLGFCLAGSAGAQTSDLVSSKALRVCADPANYPMSTRDEDGYENK
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHH
LAELVGAKLELPVQYTWFPMATGFVRNTLNAKRCDLIIGYAQGHELVLNTNHYFTSVYTI
HHHHHCCCEECCEEEEEEHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCEEEEEEEE
IVPQDSDLADVKSLADPALKGRKLGIIAGTPPSAHLARHGLIAKAKAYNLVVDRRVENPA
EEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHHHEEEEECCCCCCH
IDMLDDLSAGEIDAAVLWGPLGGPLVKSSYPGFKVIPLISEQSPPRLFFRITMGVRLGEK
HHHHHCCCCCCCCEEEEECCCCCCHHCCCCCCEEEEEEECCCCCCEEEEEEEECCHHHHH
VWQRNLNSLIRRNQDEINSLLVDAGVPLVTDLGTEVLEISN
HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2116368 [H]