Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678156

Identifier: 110678156

GI number: 110678156

Start: 775648

End: 777111

Strand: Direct

Name: 110678156

Synonym: RD1_0799

Alternate gene names: NA

Gene position: 775648-777111 (Clockwise)

Preceding gene: 110678155

Following gene: 110678157

Centisome position: 18.77

GC content: 56.15

Gene sequence:

>1464_bases
ATGACATCAAAGAATGAAACCGACCAAACAAAGCGGGCAGGGCTCGATCTTGTCGCTCTGCAGGAAAATATCCGCGCGGT
TTACGCGGCAGACGACCGGCCATGGGTGATCGGGTATAGCGGCGGAAAGGATTCAACCTGTGCCTTGCAGCTAATCTGGA
GTGCCATTCGTGCGCTTCCGGAAGACGCGAGACGCAAGCCAATCTTCGTCCTCAGTTCCGACACGCTTGTCGAAACGCCC
GTGATCGTAAACTACATCGACGATACCTTGGCAGCCATCAACGCGGCAGCGGCAGACCAGAACATGCCCATCACCGCACA
AAAGGTGGTTCCGGAGATTTCAGATAGCTTCTGGGTGAACCTGATTGGCCGCGGATATCCTGCACCGTCAAAGCGCTTTC
GCTGGTGCACGGAGCGGCTGAAGATCGATCCGGCCAATGCCTTCATCAAGAACCGCGTTGCCGAATATGGCGAGGTGGTC
ATGGTTCTGGGCGTACGGTCCTCGGAAAGCGCGACACGCGCGCAGGTGATGTCGCTGCACAAGATCGATGGTACGGCTTT
GTCTCGCCATTCGACCTTACCCGGCGCTTTCGTCTTCACGCCGATCGAGACCTTCAGTGTGGATGATGTTTGGGCTTTCT
TGCTGCAAAATCAGTCACCTTGGGGATCGGACAACCGCGATTTGCTTGCGATGTATCGAAACGCGCAAGCTGGCGAGTGC
CCACTTGTAGTCGATAAGCAAACTGAAAGCTGCGGGAATTCCCGCTTTGGCTGCTGGGTGTGCACGGTTGTGACAAAGGA
CAAGGCCATGGAAGCGCTTGTTGAGAATGGCGAGGAATGGCTTGAGCCTTTGCTTGATCTCCGTGACGAGCTGGCTGAAA
CACAAAACCCCGAGCGGAAACGAGAGTTTCGAGATTTTCGCAGACGGGACGGCTCTGTGACCTTTGTGGGCGATGCAGAG
ACATCCATTCCGGGGCCCTATCTTTTCGAATACCGCAAAGAGCTCTTGAGAAAACTTCTGGAGGCGCAAGAGCGGGTAAA
TGCCAATGCGCCACCCGGCGAGAAGACCGACCTTATTCAGGTCGAAGAACTCCGGGAAATCCGTCGGATCTGGCGGAGCG
AACAGGGTGACTGGGGCGACGCTGTTTCAGAGACCCTCAAAGCTGTGACGGGCAAGGAACTCCCAGCCGATGCGACCGAC
GGATTTGAATTCCAAGCCGATGACGCCAAGGTCTTGGCGGATGTCTGCGCCGCGCATGACTTGCCGTCACGTCTCTTGGC
CCAGCTCCTGGAAGCAGAGCGTTCTGTGCGGGGTCTGAAGCGGAGGACCCTTATTCACCGAAAGATCGCTTCGATCCTTG
AGCAAGAGTGGCGAGACGAAGGAACAGTCCTGAACGAGCGCAAAGCGCGATTGAAAGAGCGCAAGGCATCTTCGTCTGAC
CCTCTGTTTGAGACTGAGTCATGA

Upstream 100 bases:

>100_bases
CCAACGTCCTAGTTGCGGCTGTAGGCTTGCCGCTCAATGAAAAAGAACAAGCGAATGAAGACGACTACCTGGCGTCATTG
GCTGAGGAGAAAGTCGTCGC

Downstream 100 bases:

>100_bases
TTTTACAGTCTCTTTGTCTCACTAATTTTGGTCTTTATGGCGGTGAACACCGCTTTGATCTTGCACCCGAGCCAGACGGG
CAAAAACCTGTGGTTTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Sulfurtransferase DndC; 3-Phosphoadenosine 5'-Phosphosulfate Sulfotransferase; Phosphoadenosine Phosphosulphate Reductase; Sulfurtransferase Dndc

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MTSKNETDQTKRAGLDLVALQENIRAVYAADDRPWVIGYSGGKDSTCALQLIWSAIRALPEDARRKPIFVLSSDTLVETP
VIVNYIDDTLAAINAAAADQNMPITAQKVVPEISDSFWVNLIGRGYPAPSKRFRWCTERLKIDPANAFIKNRVAEYGEVV
MVLGVRSSESATRAQVMSLHKIDGTALSRHSTLPGAFVFTPIETFSVDDVWAFLLQNQSPWGSDNRDLLAMYRNAQAGEC
PLVVDKQTESCGNSRFGCWVCTVVTKDKAMEALVENGEEWLEPLLDLRDELAETQNPERKREFRDFRRRDGSVTFVGDAE
TSIPGPYLFEYRKELLRKLLEAQERVNANAPPGEKTDLIQVEELREIRRIWRSEQGDWGDAVSETLKAVTGKELPADATD
GFEFQADDAKVLADVCAAHDLPSRLLAQLLEAERSVRGLKRRTLIHRKIASILEQEWRDEGTVLNERKARLKERKASSSD
PLFETES

Sequences:

>Translated_487_residues
MTSKNETDQTKRAGLDLVALQENIRAVYAADDRPWVIGYSGGKDSTCALQLIWSAIRALPEDARRKPIFVLSSDTLVETP
VIVNYIDDTLAAINAAAADQNMPITAQKVVPEISDSFWVNLIGRGYPAPSKRFRWCTERLKIDPANAFIKNRVAEYGEVV
MVLGVRSSESATRAQVMSLHKIDGTALSRHSTLPGAFVFTPIETFSVDDVWAFLLQNQSPWGSDNRDLLAMYRNAQAGEC
PLVVDKQTESCGNSRFGCWVCTVVTKDKAMEALVENGEEWLEPLLDLRDELAETQNPERKREFRDFRRRDGSVTFVGDAE
TSIPGPYLFEYRKELLRKLLEAQERVNANAPPGEKTDLIQVEELREIRRIWRSEQGDWGDAVSETLKAVTGKELPADATD
GFEFQADDAKVLADVCAAHDLPSRLLAQLLEAERSVRGLKRRTLIHRKIASILEQEWRDEGTVLNERKARLKERKASSSD
PLFETES
>Mature_486_residues
TSKNETDQTKRAGLDLVALQENIRAVYAADDRPWVIGYSGGKDSTCALQLIWSAIRALPEDARRKPIFVLSSDTLVETPV
IVNYIDDTLAAINAAAADQNMPITAQKVVPEISDSFWVNLIGRGYPAPSKRFRWCTERLKIDPANAFIKNRVAEYGEVVM
VLGVRSSESATRAQVMSLHKIDGTALSRHSTLPGAFVFTPIETFSVDDVWAFLLQNQSPWGSDNRDLLAMYRNAQAGECP
LVVDKQTESCGNSRFGCWVCTVVTKDKAMEALVENGEEWLEPLLDLRDELAETQNPERKREFRDFRRRDGSVTFVGDAET
SIPGPYLFEYRKELLRKLLEAQERVNANAPPGEKTDLIQVEELREIRRIWRSEQGDWGDAVSETLKAVTGKELPADATDG
FEFQADDAKVLADVCAAHDLPSRLLAQLLEAERSVRGLKRRTLIHRKIASILEQEWRDEGTVLNERKARLKERKASSSDP
LFETES

Specific function: Unknown

COG id: COG0175

COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54715; Mature: 54584

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKNETDQTKRAGLDLVALQENIRAVYAADDRPWVIGYSGGKDSTCALQLIWSAIRALP
CCCCCCCCHHHHHCCHHEEEHHCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCC
EDARRKPIFVLSSDTLVETPVIVNYIDDTLAAINAAAADQNMPITAQKVVPEISDSFWVN
HHHCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHH
LIGRGYPAPSKRFRWCTERLKIDPANAFIKNRVAEYGEVVMVLGVRSSESATRAQVMSLH
HHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHH
KIDGTALSRHSTLPGAFVFTPIETFSVDDVWAFLLQNQSPWGSDNRDLLAMYRNAQAGEC
HCCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
PLVVDKQTESCGNSRFGCWVCTVVTKDKAMEALVENGEEWLEPLLDLRDELAETQNPERK
CEEEECCHHHCCCCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
REFRDFRRRDGSVTFVGDAETSIPGPYLFEYRKELLRKLLEAQERVNANAPPGEKTDLIQ
HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
VEELREIRRIWRSEQGDWGDAVSETLKAVTGKELPADATDGFEFQADDAKVLADVCAAHD
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHCC
LPSRLLAQLLEAERSVRGLKRRTLIHRKIASILEQEWRDEGTVLNERKARLKERKASSSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
PLFETES
CCCCCCC
>Mature Secondary Structure 
TSKNETDQTKRAGLDLVALQENIRAVYAADDRPWVIGYSGGKDSTCALQLIWSAIRALP
CCCCCCCHHHHHCCHHEEEHHCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCC
EDARRKPIFVLSSDTLVETPVIVNYIDDTLAAINAAAADQNMPITAQKVVPEISDSFWVN
HHHCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHH
LIGRGYPAPSKRFRWCTERLKIDPANAFIKNRVAEYGEVVMVLGVRSSESATRAQVMSLH
HHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHH
KIDGTALSRHSTLPGAFVFTPIETFSVDDVWAFLLQNQSPWGSDNRDLLAMYRNAQAGEC
HCCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
PLVVDKQTESCGNSRFGCWVCTVVTKDKAMEALVENGEEWLEPLLDLRDELAETQNPERK
CEEEECCHHHCCCCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
REFRDFRRRDGSVTFVGDAETSIPGPYLFEYRKELLRKLLEAQERVNANAPPGEKTDLIQ
HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
VEELREIRRIWRSEQGDWGDAVSETLKAVTGKELPADATDGFEFQADDAKVLADVCAAHD
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHCC
LPSRLLAQLLEAERSVRGLKRRTLIHRKIASILEQEWRDEGTVLNERKARLKERKASSSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
PLFETES
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA