Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678155

Identifier: 110678155

GI number: 110678155

Start: 774545

End: 775651

Strand: Direct

Name: 110678155

Synonym: RD1_0798

Alternate gene names: NA

Gene position: 774545-775651 (Clockwise)

Preceding gene: 110678151

Following gene: 110678156

Centisome position: 18.74

GC content: 53.66

Gene sequence:

>1107_bases
ATGAGCGGTAACTTCTATAATTTTGCAGCCATACGCGGCGTCCAGGCTGGAACCGAGTATTATGTGATCATGGTCCCTCT
TAAGATGGTTCCAAAGATTTTCGAATTCGACAGTCAGGAATTGCCAGCAGACCTGCGCGCTCAACGCGTATTGTCAAATG
TCCGCGTTCCGCAAATCGCATCCTACCTCTCGGAAAACTTCGAAGAATATACGCTCTCATCTCTCTGCGCATCTGTGGAT
GGTGATCTTGAGTTTTCCCCAGCCAGCGACGGTCTTCAGTTCCGTAATGTAGGCGAGCTACGGCTTTCGATGACAGCCCG
CATCATCCTAAACGACGGTCAGCATCGTCGCGCCGCAATCGAAGAAGCCCTCAAGACGCGACCCAAGCTCGAAAACGAAA
CCATCTCGGTTGTGCTTTTCCTCGATGAGGGGCTGGAGCGCTGCCAGCAAATGTTCGCAGACCTCAACAAGAATGCCGTA
CGCCCATCCGGGTCGTTGAACGTCCTCTATGACCGCAGAAATCCTTTGGCACGTCTGAGCACGCGCGTGTTAGAGGACAT
TCCGTTTTTCCAAGAATTCACCGAGCTCGAAAAAACATCTCTTTCGAACCGGGCCAAAAACCTCTTTACCTTGTCCAGCC
TGAATCAAGCCAACAAGTGGCTCGCTGGGCAAGATGCGGATCGGTTCGGTGAAAACACTGAAAGCACCGTGATCGCATAT
TGGCGTCAGGTTTCTGAGGTCATCCCAGACTGGCAGAAACTGATGCGTGGCGCGACGACAGCAGGCGACCTGCGAAAAGA
AACGGTTCATGCGCATGGCGTGATGCTGCAGGCTTTTGGAGTCTTAGGGGCAAGACTGATTACAGCAAAGCCGGATGGAT
GGGCCGAAACCCTGGCTCCGCTCGCGGAGATCAATTGGAGCAAGCGCAATGCCCAGCTCTGGCGTCCTCGCGTCATGGGC
GCGCGCGGAATGGATGGCAGTGTGAAATCTGTACATCTGGCGGCCAACGTCCTAGTTGCGGCTGTAGGCTTGCCGCTCAA
TGAAAAAGAACAAGCGAATGAAGACGACTACCTGGCGTCATTGGCTGAGGAGAAAGTCGTCGCATGA

Upstream 100 bases:

>100_bases
GTGGAGAGCAATTCGACAGTACAAAGCCGCTCAAATCGCGCCGCAGGCGTTGACTTCCATCTAGACTTCCATAGACTTCC
CGCTCAATGGCAGGGGTTTT

Downstream 100 bases:

>100_bases
CATCAAAGAATGAAACCGACCAAACAAAGCGGGCAGGGCTCGATCTTGTCGCTCTGCAGGAAAATATCCGCGCGGTTTAC
GCGGCAGACGACCGGCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: DGQHR Domain Protein; Bacteriophage Protein; Thiol Protease Domain-Containing Protein; DNA Thiolation Protein; DGQHR Domain-Containing Protein

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSGNFYNFAAIRGVQAGTEYYVIMVPLKMVPKIFEFDSQELPADLRAQRVLSNVRVPQIASYLSENFEEYTLSSLCASVD
GDLEFSPASDGLQFRNVGELRLSMTARIILNDGQHRRAAIEEALKTRPKLENETISVVLFLDEGLERCQQMFADLNKNAV
RPSGSLNVLYDRRNPLARLSTRVLEDIPFFQEFTELEKTSLSNRAKNLFTLSSLNQANKWLAGQDADRFGENTESTVIAY
WRQVSEVIPDWQKLMRGATTAGDLRKETVHAHGVMLQAFGVLGARLITAKPDGWAETLAPLAEINWSKRNAQLWRPRVMG
ARGMDGSVKSVHLAANVLVAAVGLPLNEKEQANEDDYLASLAEEKVVA

Sequences:

>Translated_368_residues
MSGNFYNFAAIRGVQAGTEYYVIMVPLKMVPKIFEFDSQELPADLRAQRVLSNVRVPQIASYLSENFEEYTLSSLCASVD
GDLEFSPASDGLQFRNVGELRLSMTARIILNDGQHRRAAIEEALKTRPKLENETISVVLFLDEGLERCQQMFADLNKNAV
RPSGSLNVLYDRRNPLARLSTRVLEDIPFFQEFTELEKTSLSNRAKNLFTLSSLNQANKWLAGQDADRFGENTESTVIAY
WRQVSEVIPDWQKLMRGATTAGDLRKETVHAHGVMLQAFGVLGARLITAKPDGWAETLAPLAEINWSKRNAQLWRPRVMG
ARGMDGSVKSVHLAANVLVAAVGLPLNEKEQANEDDYLASLAEEKVVA
>Mature_367_residues
SGNFYNFAAIRGVQAGTEYYVIMVPLKMVPKIFEFDSQELPADLRAQRVLSNVRVPQIASYLSENFEEYTLSSLCASVDG
DLEFSPASDGLQFRNVGELRLSMTARIILNDGQHRRAAIEEALKTRPKLENETISVVLFLDEGLERCQQMFADLNKNAVR
PSGSLNVLYDRRNPLARLSTRVLEDIPFFQEFTELEKTSLSNRAKNLFTLSSLNQANKWLAGQDADRFGENTESTVIAYW
RQVSEVIPDWQKLMRGATTAGDLRKETVHAHGVMLQAFGVLGARLITAKPDGWAETLAPLAEINWSKRNAQLWRPRVMGA
RGMDGSVKSVHLAANVLVAAVGLPLNEKEQANEDDYLASLAEEKVVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41067; Mature: 40936

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNFYNFAAIRGVQAGTEYYVIMVPLKMVPKIFEFDSQELPADLRAQRVLSNVRVPQIA
CCCCEEEHHHHHCCCCCCCEEEEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
SYLSENFEEYTLSSLCASVDGDLEFSPASDGLQFRNVGELRLSMTARIILNDGQHRRAAI
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHEEEEEEEECCCCHHHHHH
EEALKTRPKLENETISVVLFLDEGLERCQQMFADLNKNAVRPSGSLNVLYDRRNPLARLS
HHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHH
TRVLEDIPFFQEFTELEKTSLSNRAKNLFTLSSLNQANKWLAGQDADRFGENTESTVIAY
HHHHHHCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCHHHCCCCCCHHHHHH
WRQVSEVIPDWQKLMRGATTAGDLRKETVHAHGVMLQAFGVLGARLITAKPDGWAETLAP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH
LAEINWSKRNAQLWRPRVMGARGMDGSVKSVHLAANVLVAAVGLPLNEKEQANEDDYLAS
HHHCCCCCCCCHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHH
LAEEKVVA
HHHHHCCC
>Mature Secondary Structure 
SGNFYNFAAIRGVQAGTEYYVIMVPLKMVPKIFEFDSQELPADLRAQRVLSNVRVPQIA
CCCEEEHHHHHCCCCCCCEEEEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
SYLSENFEEYTLSSLCASVDGDLEFSPASDGLQFRNVGELRLSMTARIILNDGQHRRAAI
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHEEEEEEEECCCCHHHHHH
EEALKTRPKLENETISVVLFLDEGLERCQQMFADLNKNAVRPSGSLNVLYDRRNPLARLS
HHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHH
TRVLEDIPFFQEFTELEKTSLSNRAKNLFTLSSLNQANKWLAGQDADRFGENTESTVIAY
HHHHHHCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCHHHCCCCCCHHHHHH
WRQVSEVIPDWQKLMRGATTAGDLRKETVHAHGVMLQAFGVLGARLITAKPDGWAETLAP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH
LAEINWSKRNAQLWRPRVMGARGMDGSVKSVHLAANVLVAAVGLPLNEKEQANEDDYLAS
HHHCCCCCCCCHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHH
LAEEKVVA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA