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The map label for this gene is 110678031

Identifier: 110678031

GI number: 110678031

Start: 632577

End: 634364

Strand: Direct

Name: 110678031

Synonym: RD1_0654

Alternate gene names: NA

Gene position: 632577-634364 (Clockwise)

Preceding gene: 110678030

Following gene: 110678032

Centisome position: 15.31

GC content: 62.81

Gene sequence:

>1788_bases
ATGCCGCAAAGCGTCGTCAGAACGCGTCAGGCAGAGATCGCAATGTCCCAAAGCAAGAGTTTTGCAGCCAGAAAGGTGCA
TTTCCTGAACCGGTGGCACGCCACCCGCGCCGGGCGCATGCGGTCCCGGCCAGTTGGATTCGTGTCATCGCCTGAACCCC
GCACGATTGGCAGCTACGCGCGCGGGCGGCAGTTGCTGGCGGGGAATTTCCTCTTTGCAGGCCATCTGCTTGAGAGAAAA
GACGCGGACATCTGGGATTTGCCGCCCCCCAATGAAGACTTCAGTCTGGAGCTCAGCGGGTTTCAATGGCTTGACGATCT
GGCTGCTGTCGGAGATGCGGCGGCGCGCGGCAAGGCGCAGGCGTGGCTGTGGGGATGGATCGAACGGTATGGGCGTGGAC
GTGGTCCCGGCTGGACGCCCGATCTGACCGGGCGCCGTCTGATCCGCTGGATCAACCACGCGATATTCCTGCTGCGCGGC
AGCGACGGTCCGGACAGTGACACGTTTTACCGCAGTTTGAACCAGCAGACGCATTTCCTGTCGCGGCGATGGCAGGGTGC
CGCCAGTGGCCTGCCCCGGTTCGAGGCGCTCACCGGTCTGATCTATGCGGCTTTGTCGCTGGAGGGGATGCAGGCCATGG
CGATGCCTGCTCTCAAGGGTCTGGCGCGCGAGTGTCGTACGCAGATCGACGCGCAAGGGGGCCTGCCCTCGCGCAATCCC
GAAGACCTTCTGGAAGTGTTCACGCTGCTGACGTGGACAGCCGCAACGCTGAAAGAAGCCGGGTATGCCCCGCCCAGAGA
ACACCTCGAAGCCATTGCGCGGATCGCCCCGACCCTGCGCACACTGCGCCATGCGGATGGTGGTCTGGCGCGGTTTCATG
GTGGCGGGCGCGGGGCCGAAGGCTGGCTTGATCACGCCCTTGCGCAGGCGCGGATCAAGACACAACAACCCGATGGGTTG
TCGATGGGTTTTGCGCGCCTTTCGGCGGGGCGCACCAGCGTGATCATTGACGCCAGCGTGCCCCCGGCCGGGCGCGCGTC
ATTCAACGCCCATGCCTCCACACTTGCGTTTGAGGTCACCTCCGGGCGTCGCCCCCTGATCGTCAATTGCGGCTCGGGGC
GTACCTTTGGCCCGGAGTGGCGGCGGGCCGGGCGTGCAACGCCGTCCCATTCAACACTGGCGTTGGGGGGCTATTCCAGT
GCGCGCCTTGGCTCGGCGGACCCTGCAACTGGGGGCGAGCCCCTGATCGAAGCGCCAACCCACGTGCCCATCGAGATCAC
GGATGCATCGGACGGCATCCGGTTTCAGGGTGGGCATGATGGCTTTGTGCCAACCCATGGTCTGACCCATGCACGCACGC
TTGAGATGACGTTTGACGGGCGCGGCATTGCGGGTGAGGATATGCTGCTTGCCATGGGAGACCGCGAAAAGCGGCGATTT
GATCTGGCGCTGGATGCGACCAAATTGGCCGGTATCGGCTTTGAAATCCGCTTTCATCTGCATCCGGATGTGGATGCGAC
ACTTGATATGGGCGGGGCGGCGATCTCCATCGCCTTGAAAAGCGGTGAGATCTGGGTGTTTCGCCATGATGGCAGTCAAA
AGCTGAAACTCGAACCCTCGGTCTATCTGGAGGTGGGCCGTTTAAAGCCACGCTCGGCAAATCAGATTGTGCTTGCCGGT
CGGGCTATGTCATATGCGACCCGTGTCAGGTGGTCTTTGTCCAAGGCGCAGGAAACTGCGATCGGGGTGCGGGACCTGAG
CCGAGATACCCTGAATTACACCGATTAG

Upstream 100 bases:

>100_bases
GATTTTACATCGCCGTGCTGCGCAAGGCCGGGTAACATCGCGGCCATATAAGGTTGCGGGTCGACAAAGAGCGGTGACTC
GCAGCGGGCGGCGCGCTATC

Downstream 100 bases:

>100_bases
ATCGCCCAAAGGACCAGATATGACCGACCTTGCCCCGCTGCGCCGCGCGCTTCTTTCCGTTTCAGACAAGACCGGGCTGG
TGGCGCTGGGGAAGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Heparinase II/III-Like; Heparinase II/III-Like Protein; Heparinase II/III-Like Family Protein; Cytoplasmic Protein; Heparinase II/Iii Family Protein

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MPQSVVRTRQAEIAMSQSKSFAARKVHFLNRWHATRAGRMRSRPVGFVSSPEPRTIGSYARGRQLLAGNFLFAGHLLERK
DADIWDLPPPNEDFSLELSGFQWLDDLAAVGDAAARGKAQAWLWGWIERYGRGRGPGWTPDLTGRRLIRWINHAIFLLRG
SDGPDSDTFYRSLNQQTHFLSRRWQGAASGLPRFEALTGLIYAALSLEGMQAMAMPALKGLARECRTQIDAQGGLPSRNP
EDLLEVFTLLTWTAATLKEAGYAPPREHLEAIARIAPTLRTLRHADGGLARFHGGGRGAEGWLDHALAQARIKTQQPDGL
SMGFARLSAGRTSVIIDASVPPAGRASFNAHASTLAFEVTSGRRPLIVNCGSGRTFGPEWRRAGRATPSHSTLALGGYSS
ARLGSADPATGGEPLIEAPTHVPIEITDASDGIRFQGGHDGFVPTHGLTHARTLEMTFDGRGIAGEDMLLAMGDREKRRF
DLALDATKLAGIGFEIRFHLHPDVDATLDMGGAAISIALKSGEIWVFRHDGSQKLKLEPSVYLEVGRLKPRSANQIVLAG
RAMSYATRVRWSLSKAQETAIGVRDLSRDTLNYTD

Sequences:

>Translated_595_residues
MPQSVVRTRQAEIAMSQSKSFAARKVHFLNRWHATRAGRMRSRPVGFVSSPEPRTIGSYARGRQLLAGNFLFAGHLLERK
DADIWDLPPPNEDFSLELSGFQWLDDLAAVGDAAARGKAQAWLWGWIERYGRGRGPGWTPDLTGRRLIRWINHAIFLLRG
SDGPDSDTFYRSLNQQTHFLSRRWQGAASGLPRFEALTGLIYAALSLEGMQAMAMPALKGLARECRTQIDAQGGLPSRNP
EDLLEVFTLLTWTAATLKEAGYAPPREHLEAIARIAPTLRTLRHADGGLARFHGGGRGAEGWLDHALAQARIKTQQPDGL
SMGFARLSAGRTSVIIDASVPPAGRASFNAHASTLAFEVTSGRRPLIVNCGSGRTFGPEWRRAGRATPSHSTLALGGYSS
ARLGSADPATGGEPLIEAPTHVPIEITDASDGIRFQGGHDGFVPTHGLTHARTLEMTFDGRGIAGEDMLLAMGDREKRRF
DLALDATKLAGIGFEIRFHLHPDVDATLDMGGAAISIALKSGEIWVFRHDGSQKLKLEPSVYLEVGRLKPRSANQIVLAG
RAMSYATRVRWSLSKAQETAIGVRDLSRDTLNYTD
>Mature_594_residues
PQSVVRTRQAEIAMSQSKSFAARKVHFLNRWHATRAGRMRSRPVGFVSSPEPRTIGSYARGRQLLAGNFLFAGHLLERKD
ADIWDLPPPNEDFSLELSGFQWLDDLAAVGDAAARGKAQAWLWGWIERYGRGRGPGWTPDLTGRRLIRWINHAIFLLRGS
DGPDSDTFYRSLNQQTHFLSRRWQGAASGLPRFEALTGLIYAALSLEGMQAMAMPALKGLARECRTQIDAQGGLPSRNPE
DLLEVFTLLTWTAATLKEAGYAPPREHLEAIARIAPTLRTLRHADGGLARFHGGGRGAEGWLDHALAQARIKTQQPDGLS
MGFARLSAGRTSVIIDASVPPAGRASFNAHASTLAFEVTSGRRPLIVNCGSGRTFGPEWRRAGRATPSHSTLALGGYSSA
RLGSADPATGGEPLIEAPTHVPIEITDASDGIRFQGGHDGFVPTHGLTHARTLEMTFDGRGIAGEDMLLAMGDREKRRFD
LALDATKLAGIGFEIRFHLHPDVDATLDMGGAAISIALKSGEIWVFRHDGSQKLKLEPSVYLEVGRLKPRSANQIVLAGR
AMSYATRVRWSLSKAQETAIGVRDLSRDTLNYTD

Specific function: Unknown

COG id: COG5360

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64913; Mature: 64782

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSVVRTRQAEIAMSQSKSFAARKVHFLNRWHATRAGRMRSRPVGFVSSPEPRTIGSYA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
RGRQLLAGNFLFAGHLLERKDADIWDLPPPNEDFSLELSGFQWLDDLAAVGDAAARGKAQ
HCCEEEECCEEEECHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHCCCCH
AWLWGWIERYGRGRGPGWTPDLTGRRLIRWINHAIFLLRGSDGPDSDTFYRSLNQQTHFL
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHH
SRRWQGAASGLPRFEALTGLIYAALSLEGMQAMAMPALKGLARECRTQIDAQGGLPSRNP
HHHHCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
EDLLEVFTLLTWTAATLKEAGYAPPREHLEAIARIAPTLRTLRHADGGLARFHGGGRGAE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH
GWLDHALAQARIKTQQPDGLSMGFARLSAGRTSVIIDASVPPAGRASFNAHASTLAFEVT
HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEC
SGRRPLIVNCGSGRTFGPEWRRAGRATPSHSTLALGGYSSARLGSADPATGGEPLIEAPT
CCCCCEEEECCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCC
HVPIEITDASDGIRFQGGHDGFVPTHGLTHARTLEMTFDGRGIAGEDMLLAMGDREKRRF
CCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCEE
DLALDATKLAGIGFEIRFHLHPDVDATLDMGGAAISIALKSGEIWVFRHDGSQKLKLEPS
EEEEECHHHCCCCEEEEEEECCCCCCEECCCCEEEEEEEECCCEEEEEECCCCEEEECCC
VYLEVGRLKPRSANQIVLAGRAMSYATRVRWSLSKAQETAIGVRDLSRDTLNYTD
EEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PQSVVRTRQAEIAMSQSKSFAARKVHFLNRWHATRAGRMRSRPVGFVSSPEPRTIGSYA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
RGRQLLAGNFLFAGHLLERKDADIWDLPPPNEDFSLELSGFQWLDDLAAVGDAAARGKAQ
HCCEEEECCEEEECHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHCCCCH
AWLWGWIERYGRGRGPGWTPDLTGRRLIRWINHAIFLLRGSDGPDSDTFYRSLNQQTHFL
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHH
SRRWQGAASGLPRFEALTGLIYAALSLEGMQAMAMPALKGLARECRTQIDAQGGLPSRNP
HHHHCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
EDLLEVFTLLTWTAATLKEAGYAPPREHLEAIARIAPTLRTLRHADGGLARFHGGGRGAE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH
GWLDHALAQARIKTQQPDGLSMGFARLSAGRTSVIIDASVPPAGRASFNAHASTLAFEVT
HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEC
SGRRPLIVNCGSGRTFGPEWRRAGRATPSHSTLALGGYSSARLGSADPATGGEPLIEAPT
CCCCCEEEECCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCC
HVPIEITDASDGIRFQGGHDGFVPTHGLTHARTLEMTFDGRGIAGEDMLLAMGDREKRRF
CCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCEE
DLALDATKLAGIGFEIRFHLHPDVDATLDMGGAAISIALKSGEIWVFRHDGSQKLKLEPS
EEEEECHHHCCCCEEEEEEECCCCCCEECCCCEEEEEEEECCCEEEEEECCCCEEEECCC
VYLEVGRLKPRSANQIVLAGRAMSYATRVRWSLSKAQETAIGVRDLSRDTLNYTD
EEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA