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The map label for this gene is yddS [H]

Identifier: 110677950

GI number: 110677950

Start: 549751

End: 550899

Strand: Direct

Name: yddS [H]

Synonym: RD1_0566

Alternate gene names: 110677950

Gene position: 549751-550899 (Clockwise)

Preceding gene: 110677949

Following gene: 110677952

Centisome position: 13.3

GC content: 57.62

Gene sequence:

>1149_bases
TTGTTGGTCGCGAACACAATCCTTGGCACGGCGTTTCCCATTCAGTTGATCCTCGGAGGGCTGGCGGGACTCGTGCTGGC
ACCCAGCCCGACGCTGGCAACACTTCCCGCGTCGATCCAGACACTGGCGGGCATGGTCGCGGCTGCGCCGATTTCGCTCC
TGATGGGGCGTATGGGGCGACGCGCCGGTTTTGCCCTTGGCGGTTTGATGACGCTGATGGGAGCAACAACAGCCACACAA
GCCCTCTACGCTGACAACTTCGTGCTGCTTTGCGTCGCGCATTTTCTGATGGGCGCAGGTTGGGCTTCGTTTCAGTATTT
CCGTTTCGCTGCGGGTGAAGTGGTTGAGAAGAAGTGGCGACCAGTGGCAATCTCACTGATGTTGAGTTCGCTTTTGATCG
CGGCAATCGGTGGTCCGCAACTCTTTATTGCTGCGAAAGACATACTCGCCCCTGTCCCATTTGCCGGGGCATATGTGGCC
ACAGGTCTGATTGCAGTGCTCGGCCTCGTCCCGCTTTTGGCTGTGCAGATGCCGCAACCAAAGGGATCATCGCAGGATAC
GCCAGCACGCAAGTTCGCGCCACGCGCTGCACTTCGCAGACCAGCCATCATGCATGCGGTCGGGATTGCTGCGGTGTCTC
AAGGGGTGATGGTCTTTTTGATGATCCCGACACCGATCGCCATGGTCGGATGCGGGTTCAGTGAGGATACTGCGGGCGAC
GTTGTGCGCTGGCACATCGTTGCGATGTTCGCGCCCAGCTTCTTTACGGGCTTTCTGATCAAACGTTTTGGGGCATCCAC
CGTAGCGATCACCGGGCTGATCATTATCGTCGCAGCGGCGGTTGCCGCCACGCTGGGTCTTTCCGCAATGCACTTTTACG
GCGCATTGATAGTGTTGGGGGTAGGTTGGAACTTTGGTTTTATCGGTGCCACGGCAATGTTGGACGCCGCCGTCAGCGAA
AATAAAAAGGCTACGGTTCAGGGCGCCAACGACACCATTATCGCATTGGTTTCGACCATCTGCGCATTTGCCGCAGGCTT
TGTTGTATCGAGCCTCGGCTGGGTTTTTCTCGCCATGATTTCAGGTGGCGTTGTTGTTCTGGCGCTTGGTGTGTTGTTTG
CGGACCGGGCGAGAGTATCGCATACCTAG

Upstream 100 bases:

>100_bases
ATGCTCCCTATCGCCCTATACTCTTTCACAGTGCACTCCATCCAAAGGCCTGAAGATTGTGTCGGTCAGATCTATCCTTC
TCAATCGAAACTTTGCAGGC

Downstream 100 bases:

>100_bases
AGTCTCGATGTCAGGCAAGCGCTGGACGCCTGCGCCATCGTACCTTTGCGGTTTGCCTGCAACCGCACCGCCGGTGAGGG
TCGCGATTTGCGAACCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MLVANTILGTAFPIQLILGGLAGLVLAPSPTLATLPASIQTLAGMVAAAPISLLMGRMGRRAGFALGGLMTLMGATTATQ
ALYADNFVLLCVAHFLMGAGWASFQYFRFAAGEVVEKKWRPVAISLMLSSLLIAAIGGPQLFIAAKDILAPVPFAGAYVA
TGLIAVLGLVPLLAVQMPQPKGSSQDTPARKFAPRAALRRPAIMHAVGIAAVSQGVMVFLMIPTPIAMVGCGFSEDTAGD
VVRWHIVAMFAPSFFTGFLIKRFGASTVAITGLIIIVAAAVAATLGLSAMHFYGALIVLGVGWNFGFIGATAMLDAAVSE
NKKATVQGANDTIIALVSTICAFAAGFVVSSLGWVFLAMISGGVVVLALGVLFADRARVSHT

Sequences:

>Translated_382_residues
MLVANTILGTAFPIQLILGGLAGLVLAPSPTLATLPASIQTLAGMVAAAPISLLMGRMGRRAGFALGGLMTLMGATTATQ
ALYADNFVLLCVAHFLMGAGWASFQYFRFAAGEVVEKKWRPVAISLMLSSLLIAAIGGPQLFIAAKDILAPVPFAGAYVA
TGLIAVLGLVPLLAVQMPQPKGSSQDTPARKFAPRAALRRPAIMHAVGIAAVSQGVMVFLMIPTPIAMVGCGFSEDTAGD
VVRWHIVAMFAPSFFTGFLIKRFGASTVAITGLIIIVAAAVAATLGLSAMHFYGALIVLGVGWNFGFIGATAMLDAAVSE
NKKATVQGANDTIIALVSTICAFAAGFVVSSLGWVFLAMISGGVVVLALGVLFADRARVSHT
>Mature_382_residues
MLVANTILGTAFPIQLILGGLAGLVLAPSPTLATLPASIQTLAGMVAAAPISLLMGRMGRRAGFALGGLMTLMGATTATQ
ALYADNFVLLCVAHFLMGAGWASFQYFRFAAGEVVEKKWRPVAISLMLSSLLIAAIGGPQLFIAAKDILAPVPFAGAYVA
TGLIAVLGLVPLLAVQMPQPKGSSQDTPARKFAPRAALRRPAIMHAVGIAAVSQGVMVFLMIPTPIAMVGCGFSEDTAGD
VVRWHIVAMFAPSFFTGFLIKRFGASTVAITGLIIIVAAAVAATLGLSAMHFYGALIVLGVGWNFGFIGATAMLDAAVSE
NKKATVQGANDTIIALVSTICAFAAGFVVSSLGWVFLAMISGGVVVLALGVLFADRARVSHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 39278; Mature: 39278

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVANTILGTAFPIQLILGGLAGLVLAPSPTLATLPASIQTLAGMVAAAPISLLMGRMGR
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCH
RAGFALGGLMTLMGATTATQALYADNFVLLCVAHFLMGAGWASFQYFRFAAGEVVEKKWR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PVAISLMLSSLLIAAIGGPQLFIAAKDILAPVPFAGAYVATGLIAVLGLVPLLAVQMPQP
CHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
KGSSQDTPARKFAPRAALRRPAIMHAVGIAAVSQGVMVFLMIPTPIAMVGCGFSEDTAGD
CCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCCCCH
VVRWHIVAMFAPSFFTGFLIKRFGASTVAITGLIIIVAAAVAATLGLSAMHFYGALIVLG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VGWNFGFIGATAMLDAAVSENKKATVQGANDTIIALVSTICAFAAGFVVSSLGWVFLAMI
CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGGVVVLALGVLFADRARVSHT
HCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLVANTILGTAFPIQLILGGLAGLVLAPSPTLATLPASIQTLAGMVAAAPISLLMGRMGR
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCH
RAGFALGGLMTLMGATTATQALYADNFVLLCVAHFLMGAGWASFQYFRFAAGEVVEKKWR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PVAISLMLSSLLIAAIGGPQLFIAAKDILAPVPFAGAYVATGLIAVLGLVPLLAVQMPQP
CHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
KGSSQDTPARKFAPRAALRRPAIMHAVGIAAVSQGVMVFLMIPTPIAMVGCGFSEDTAGD
CCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCCCCH
VVRWHIVAMFAPSFFTGFLIKRFGASTVAITGLIIIVAAAVAATLGLSAMHFYGALIVLG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VGWNFGFIGATAMLDAAVSENKKATVQGANDTIIALVSTICAFAAGFVVSSLGWVFLAMI
CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGGVVVLALGVLFADRARVSHT
HCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]