Click here to switch to the map view.

The map label for this gene is pld1 [H]

Identifier: 110677892

GI number: 110677892

Start: 492572

End: 493588

Strand: Direct

Name: pld1 [H]

Synonym: RD1_0506

Alternate gene names: 110677892

Gene position: 492572-493588 (Clockwise)

Preceding gene: 110677887

Following gene: 110677893

Centisome position: 11.92

GC content: 59.88

Gene sequence:

>1017_bases
ATGGACCACGCGACAAGGAATAAATTCGGCCGGGTTGATCTTGAGGTCACTGCGTTCGGGTTTGGCACAGCCCCGGTGGG
CAACATTTTCCGCGAGATCGACGAAGCGACATCCGACGGCATGTTTCAGGCGGCATGGGATGCAGGCGTCCGGTATTATG
ATACAGCGCCCATGTACGGCCACGGCCTTGCCGAACTGCGCACAGGCCAATCGCTGCGGTGGAAGAACCGCGATGATCTC
GTGCTGTCATCAAAGGTCGGGCGCCGCCTCGTTCCCGCAAGGCGGGGCGATATCGACTTTGCGCCATGGACGAACGCGGC
GCCTTTCAATCTTGAATTTGACTATACCTATGATGGCACGATGCGCGCCTTTGAAGACAGCCTGCAACGGCTGGCGCTTG
AGCGGATGGATATCTGTTTTATCCACGACATCGACGTTTTCACCCGTGGCGACGCGCAGCCTGACGTTTTTAAACAGGCC
ATGGATGGCGCGTGGAAAGCGCTGGCCAAATTGCGCGATGAGGGTGTCGTTTCAGCAATTGGCGTCGGGGTAAACGAATG
GCAGGTCTGTCAGGCGGCCCTTGAGGCGCGTGATTTTGACTGTTTTCTGCTGGCCGGGCGCTACACGCTTTTGGAGCAGG
AGGCGCAGGATACGTTCCTGCCGATGTGTGAAGCGCGCGGTGCCGCAGTCGTTGTCGGCGGCGGGTTCAATTCCGGCATC
CTGGCAACGGGGGCGCGGGCAGGTGCCAAATACAACTATGCCCCCGCCCCCGCAGAGATCATGGCGCGCGTCGCAAAGAT
CGAGGCGGTATGCGCGGACCATCAGGTGCCATTGCCCGCAGCGGCCTTGCAATTCGTCGTCGCACACCCTTCCATCCCCT
CCTTTATCGCAGGCACGCGGACCATCGCGCAGTTGGAGCAGAACCTAAAATGGTTCCGCCACGAAATTCCTGCAGATTTC
TGGGCCGAACTGAAACACGAAGGGCTGCTGCGCACCGATGCGCCGGTGCCGGTATGA

Upstream 100 bases:

>100_bases
TAGGAAGACAACCAACAGGCGTCAAGCGATTCAAGACTTGATTTGCACTGTCTGCTCCGCCACGATTAACCATATAGTTA
CTTAGTCGGAAGGACATGGG

Downstream 100 bases:

>100_bases
ACCTCTCGCCCGGCAGGTACGGGTATCACGATCTGGCAAGCGGTGATTGCCTTGTGACAGGCGCACGCGTGATATCGGCA
GAGTTGATAGACGATTTTGC

Product: oxidoreductase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MDHATRNKFGRVDLEVTAFGFGTAPVGNIFREIDEATSDGMFQAAWDAGVRYYDTAPMYGHGLAELRTGQSLRWKNRDDL
VLSSKVGRRLVPARRGDIDFAPWTNAAPFNLEFDYTYDGTMRAFEDSLQRLALERMDICFIHDIDVFTRGDAQPDVFKQA
MDGAWKALAKLRDEGVVSAIGVGVNEWQVCQAALEARDFDCFLLAGRYTLLEQEAQDTFLPMCEARGAAVVVGGGFNSGI
LATGARAGAKYNYAPAPAEIMARVAKIEAVCADHQVPLPAAALQFVVAHPSIPSFIAGTRTIAQLEQNLKWFRHEIPADF
WAELKHEGLLRTDAPVPV

Sequences:

>Translated_338_residues
MDHATRNKFGRVDLEVTAFGFGTAPVGNIFREIDEATSDGMFQAAWDAGVRYYDTAPMYGHGLAELRTGQSLRWKNRDDL
VLSSKVGRRLVPARRGDIDFAPWTNAAPFNLEFDYTYDGTMRAFEDSLQRLALERMDICFIHDIDVFTRGDAQPDVFKQA
MDGAWKALAKLRDEGVVSAIGVGVNEWQVCQAALEARDFDCFLLAGRYTLLEQEAQDTFLPMCEARGAAVVVGGGFNSGI
LATGARAGAKYNYAPAPAEIMARVAKIEAVCADHQVPLPAAALQFVVAHPSIPSFIAGTRTIAQLEQNLKWFRHEIPADF
WAELKHEGLLRTDAPVPV
>Mature_338_residues
MDHATRNKFGRVDLEVTAFGFGTAPVGNIFREIDEATSDGMFQAAWDAGVRYYDTAPMYGHGLAELRTGQSLRWKNRDDL
VLSSKVGRRLVPARRGDIDFAPWTNAAPFNLEFDYTYDGTMRAFEDSLQRLALERMDICFIHDIDVFTRGDAQPDVFKQA
MDGAWKALAKLRDEGVVSAIGVGVNEWQVCQAALEARDFDCFLLAGRYTLLEQEAQDTFLPMCEARGAAVVVGGGFNSGI
LATGARAGAKYNYAPAPAEIMARVAKIEAVCADHQVPLPAAALQFVVAHPSIPSFIAGTRTIAQLEQNLKWFRHEIPADF
WAELKHEGLLRTDAPVPV

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase family [H]

Homologues:

Organism=Escherichia coli, GI1788070, Length=313, Percent_Identity=22.6837060702875, Blast_Score=83, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI212645785, Length=302, Percent_Identity=24.1721854304636, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646155, Length=308, Percent_Identity=26.2987012987013, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646159, Length=327, Percent_Identity=25.6880733944954, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: =1.1.1.107 [H]

Molecular weight: Translated: 37262; Mature: 37262

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHATRNKFGRVDLEVTAFGFGTAPVGNIFREIDEATSDGMFQAAWDAGVRYYDTAPMYG
CCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHCCCEEEECCCCCC
HGLAELRTGQSLRWKNRDDLVLSSKVGRRLVPARRGDIDFAPWTNAAPFNLEFDYTYDGT
CCHHHHHCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCH
MRAFEDSLQRLALERMDICFIHDIDVFTRGDAQPDVFKQAMDGAWKALAKLRDEGVVSAI
HHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEC
GVGVNEWQVCQAALEARDFDCFLLAGRYTLLEQEAQDTFLPMCEARGAAVVVGGGFNSGI
CCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCE
LATGARAGAKYNYAPAPAEIMARVAKIEAVCADHQVPLPAAALQFVVAHPSIPSFIAGTR
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHH
TIAQLEQNLKWFRHEIPADFWAELKHEGLLRTDAPVPV
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure
MDHATRNKFGRVDLEVTAFGFGTAPVGNIFREIDEATSDGMFQAAWDAGVRYYDTAPMYG
CCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHCCCEEEECCCCCC
HGLAELRTGQSLRWKNRDDLVLSSKVGRRLVPARRGDIDFAPWTNAAPFNLEFDYTYDGT
CCHHHHHCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCH
MRAFEDSLQRLALERMDICFIHDIDVFTRGDAQPDVFKQAMDGAWKALAKLRDEGVVSAI
HHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEC
GVGVNEWQVCQAALEARDFDCFLLAGRYTLLEQEAQDTFLPMCEARGAAVVVGGGFNSGI
CCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCE
LATGARAGAKYNYAPAPAEIMARVAKIEAVCADHQVPLPAAALQFVVAHPSIPSFIAGTR
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHH
TIAQLEQNLKWFRHEIPADFWAELKHEGLLRTDAPVPV
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA