| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is maoC [C]
Identifier: 110677893
GI number: 110677893
Start: 493585
End: 494031
Strand: Direct
Name: maoC [C]
Synonym: RD1_0507
Alternate gene names: 110677893
Gene position: 493585-494031 (Clockwise)
Preceding gene: 110677892
Following gene: 110677897
Centisome position: 11.94
GC content: 56.15
Gene sequence:
>447_bases ATGAACCTCTCGCCCGGCAGGTACGGGTATCACGATCTGGCAAGCGGTGATTGCCTTGTGACAGGCGCACGCGTGATATC GGCAGAGTTGATAGACGATTTTGCGCGTGTCAGCGGCGATACCTACGAAATCCATATGTCGGACGCGGCTGCGCAGGCCA AAGGTTTCGAACGGCGCGTCGCCCATGGATTGTTGGTTCTGGCCGTCATTGATGGATTGAAAAACAACGCGCCAGCCCGT TTTGACGCGTTGGCCTCACTGGGCTGGACATGGCGGTTCGTCGCGCCGGTTCTGGTCGGTGATACGATTTCTGCAAGGTT TGTGATCCGCGAAAAACGCCTGACCGCAAACGGAAAGCGCGGCATCACAAAGATCACAGCGCAGGCCATGAACCAGCATG GCGCCATTGTTCAGGAAGGCGAAAACGGTCTTATTTTCGACCTTTAG
Upstream 100 bases:
>100_bases TGGAGCAGAACCTAAAATGGTTCCGCCACGAAATTCCTGCAGATTTCTGGGCCGAACTGAAACACGAAGGGCTGCTGCGC ACCGATGCGCCGGTGCCGGT
Downstream 100 bases:
>100_bases AGCGGCTGACGAAATACCTGACACATCAAGTATCACGTAACACTTTGAGATCTTTGATTTCAGGCAGCGTCACGTGATCG AGGTTTTTCGCATGACGCTT
Product: MaoC-like protein, putative
Products: NA
Alternate protein names: Dehydratase; Phenylacetic Acid Degradation Protein PaaN; MaoC Domain Protein Dehydratase; MaoC Domain-Containing Protein Dehydratase; Monoamine Oxidase Regulatory Protein; MaoC Domain-Containing Protein; Acyl Dehydratase; Ring-Opening Protein; MaoC-Like Protein; Dehydrogenase; MaoC-Like Domain-Containing Protein; MaoC-Like Domain-Containing; MaoC-Related Acyl Dehydratase
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNLSPGRYGYHDLASGDCLVTGARVISAELIDDFARVSGDTYEIHMSDAAAQAKGFERRVAHGLLVLAVIDGLKNNAPAR FDALASLGWTWRFVAPVLVGDTISARFVIREKRLTANGKRGITKITAQAMNQHGAIVQEGENGLIFDL
Sequences:
>Translated_148_residues MNLSPGRYGYHDLASGDCLVTGARVISAELIDDFARVSGDTYEIHMSDAAAQAKGFERRVAHGLLVLAVIDGLKNNAPAR FDALASLGWTWRFVAPVLVGDTISARFVIREKRLTANGKRGITKITAQAMNQHGAIVQEGENGLIFDL >Mature_148_residues MNLSPGRYGYHDLASGDCLVTGARVISAELIDDFARVSGDTYEIHMSDAAAQAKGFERRVAHGLLVLAVIDGLKNNAPAR FDALASLGWTWRFVAPVLVGDTISARFVIREKRLTANGKRGITKITAQAMNQHGAIVQEGENGLIFDL
Specific function: Phenylacetic acid aerobic catabolism. [C]
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787653, Length=141, Percent_Identity=32.6241134751773, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15982; Mature: 15982
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSPGRYGYHDLASGDCLVTGARVISAELIDDFARVSGDTYEIHMSDAAAQAKGFERRV CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH AHGLLVLAVIDGLKNNAPARFDALASLGWTWRFVAPVLVGDTISARFVIREKRLTANGKR HHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC GITKITAQAMNQHGAIVQEGENGLIFDL CHHHHHHHHHHCCCCEEEECCCCEEEEC >Mature Secondary Structure MNLSPGRYGYHDLASGDCLVTGARVISAELIDDFARVSGDTYEIHMSDAAAQAKGFERRV CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH AHGLLVLAVIDGLKNNAPARFDALASLGWTWRFVAPVLVGDTISARFVIREKRLTANGKR HHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC GITKITAQAMNQHGAIVQEGENGLIFDL CHHHHHHHHHHCCCCEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA